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L3_079_000G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_69_1
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(104..7963)
DNA (7860bp) protein (2620aa)
Rhs family protein n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FRI8_9ACTN
Rhs family protein {ECO:0000313|EMBL:CCY06254.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
Rhs family protein
L3_079_000G1_scaffold_69_2
unknown

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8094..8372
DNA (279bp) protein (93aa)

This feature has no annotations

L3_079_000G1_scaffold_69_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8455..9357)
DNA (903bp) protein (301aa)
Site-specific recombinase, phage integrase family n=2 Tax=Coprococcus RepID=C0BD33_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDB85649.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Site-specific recombinase XerD
L3_079_000G1_scaffold_69_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9487..10425)
DNA (939bp) protein (313aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Transketolase C-terminal subunit n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9Q4_9FIRM
Transketolase C-terminal subunit {ECO:0000313|EMBL:CDC17449.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_079_000G1_scaffold_69_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10413..11249)
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B678_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49597.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_079_000G1_scaffold_69_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11268..11921)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Fructose-6-phosphate aldolase n=4 Tax=Clostridiales RepID=V8BTF6_RUMGN
L3_079_000G1_scaffold_69_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12162..13274)
DNA (1113bp) protein (371aa)
Putative ribose operon repressor n=1 Tax=Clostridium sp. D5 RepID=F0Z499_9CLOT
Putative ribose operon repressor {ECO:0000313|EMBL:EGB91212.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
putative transcriptional regulator
L3_079_000G1_scaffold_69_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13326..13673)
DNA (348bp) protein (116aa)
Recombination protein RecR n=2 Tax=Clostridiales RepID=D4M192_9FIRM
recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_000G1_scaffold_69_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13924..14277)
DNA (354bp) protein (118aa)
Nucleoid-associated protein RUMLAC_01029 n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNJ3_9FIRM
Nucleoid-associated protein RUMLAC_01029 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
conserved hypothetical protein TIGR00103
L3_079_000G1_scaffold_69_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14280..15860)
DNA (1581bp) protein (527aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, gamma and tau subunits n=1 Tax=Clostridium sp. D5 RepID=F0Z496_9CLOT
DNA polymerase III, gamma and tau subunits {ECO:0000313|EMBL:EGB91209.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L3_079_000G1_scaffold_69_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15880..16956)
DNA (1077bp) protein (359aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Ruminococcus lactaris RepID=B5CNJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23769.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_079_000G1_scaffold_69_12
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17111..17422)
DNA (312bp) protein (104aa)
PTS system, galactitol-specific IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MBK3_9FIRM
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EDR98437.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
L3_079_000G1_scaffold_69_13
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17419..18603)
DNA (1185bp) protein (395aa)
Cyanate permease n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W6D8_DESOD
cyanate permease
Cyanate permease {ECO:0000313|EMBL:AET68145.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_079_000G1_scaffold_69_14
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18615..19493)
DNA (879bp) protein (293aa)
Fructose-bisphosphate aldolase n=1 Tax=Dorea sp. CAG:105 RepID=R5D4I4_9FIRM
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CCX75145.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Fba; fructose/tagatose bisphosphate aldolase
L3_079_000G1_scaffold_69_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19514..20404)
DNA (891bp) protein (297aa)
hgd; 2-(hydroxymethyl)glutarate dehydrogenase (EC:1.1.1.291)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ERG8_CLOPA
Putative 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EDS10730.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_079_000G1_scaffold_69_16
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20421..21473)
DNA (1053bp) protein (351aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG72307.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG72307.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C6H2_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
L3_079_000G1_scaffold_69_17
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21507..21959)
DNA (453bp) protein (151aa)
mtlA1; PTS system galactitol-specific transporter subunit IIA (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CC02_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EDS71799.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
L3_079_000G1_scaffold_69_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21970..23103)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
N-acetylglucosamine-6-phosphate deacetylase n=5 Tax=Bacteroidales RepID=A6L8K7_PARD8
N-acetylglucosamine-6-phosphate deacetylase
L3_079_000G1_scaffold_69_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23178..24440)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RYB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14537.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
PTS system galactitol-specific transporter subunit IIC
L3_079_000G1_scaffold_69_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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24713..26824
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06285.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transcriptional antiterminator BglG
L3_079_000G1_scaffold_69_21
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26826..27086
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C566_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47426.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
phosphotransferase system, phosphocarrier protein HPr
L3_079_000G1_scaffold_69_22
unknown

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comp(27211..27672)
DNA (462bp) protein (154aa)

This feature has no annotations

L3_079_000G1_scaffold_69_23
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27741..28193)
DNA (453bp) protein (151aa)
PTS system fructose IIA component n=2 Tax=Anaerostipes RepID=R6RNZ5_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:EDR96091.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
PTS system, mannose-specific IIAB components
L3_079_000G1_scaffold_69_24
unknown

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comp(28217..28870)
DNA (654bp) protein (218aa)
phosphoglycerate mutase
L3_079_000G1_scaffold_69_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(28871..30829)
DNA (1959bp) protein (653aa)
Sigma-54 interaction domain family protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R747_9THEO
Sigma-54 interaction domain family protein {ECO:0000313|EMBL:EEB76269.1}; Transcriptional regulator {ECO:0000313|EMBL:KKC30633.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
transcriptional antiterminator
L3_079_000G1_scaffold_69_26
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30847..31692)
DNA (846bp) protein (282aa)
PTS system mannose/fructose/sorbose family IID component n=3 Tax=Anaerostipes RepID=B0MJ22_9FIRM
PTS system mannose/fructose/sorbose family IID protein {ECO:0000313|EMBL:CDC35561.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_079_000G1_scaffold_69_27
Lactobacillus helsingborgensis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(31709..32458)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2SJS6_9ENTE
PTS Man IIC {ECO:0000313|EMBL:KJY65509.1}; TaxID=1218494 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus helsingborgensis.;"
PTS sorbose transporter subunit IIC
L3_079_000G1_scaffold_69_28
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(32477..32986)
DNA (510bp) protein (170aa)
PTS sugar transporter n=1 Tax=Sporolactobacillus vineae RepID=UPI00028A2076
Uncharacterized protein {ECO:0000313|EMBL:EOH74983.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;"
hypothetical protein
L3_079_000G1_scaffold_69_29
Succinatimonas hippei, Succinatimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33248..34213)
DNA (966bp) protein (322aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFY07882.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFY07882.1};; TaxID=762983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Succinivibrionaceae; Succinatimonas.;" source="Succinatimonas hippei YIT 12066.;"
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.29)
4-phosphoerythronate dehydrogenase n=1 Tax=Succinatimonas hippei YIT 12066 RepID=E8LHY6_9GAMM
L3_079_000G1_scaffold_69_30
CG_Delta_04, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(34235..35113)
DNA (879bp) protein (293aa)
glycyl-radical enzyme activating protein family (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme n=2 Tax=Clostridium RepID=D8GRB4_CLOLD
Tax=CG_Delta_04
Displaying items 1-30 of 129 in total

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