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L3_079_000G1_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_108_1
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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262..1143
DNA (882bp) protein (294aa)
Transcriptional regulator RpiR family n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YSX9_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CDA29910.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
RpiR family transcriptional regulator
L3_079_000G1_scaffold_108_2
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1485..3419
DNA (1935bp) protein (645aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03241.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KIR03241.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
fruA2; PTS system fructose-specific EIIABC component (EC:2.7.1.- 2.7.1.69)
PTS system, fructose subfamily, IIC subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7LY71_9CLOT
L3_079_000G1_scaffold_108_3
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3461..4129
DNA (669bp) protein (223aa)
Ribose-5-phosphate isomerase {ECO:0000256|SAAS:SAAS00087684}; EC=5.3.1.6 {ECO:0000256|SAAS:SAAS00087684};; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YZJ2_9FIRM
L3_079_000G1_scaffold_108_4
Streptococcus parauberis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4129..5100
DNA (972bp) protein (324aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C092_9FIRM
Gfo/Idh/MocA family oxidoreductase {ECO:0000313|EMBL:GAJ61331.1}; TaxID=1348 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parauberis.;"
putative dehydrogenase
L3_079_000G1_scaffold_108_5
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5114..5938
DNA (825bp) protein (275aa)
HAD hydrolase, family IIB n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C093_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03242.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
HAD-superfamily hydrolase, subfamily IIB
L3_079_000G1_scaffold_108_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6020..6937
DNA (918bp) protein (306aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
fructose-1-phosphate kinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=2 Tax=Ruminococcus lactaris RepID=B5CKY6_9FIRM
L3_079_000G1_scaffold_108_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7035..8213
DNA (1179bp) protein (393aa)
Leucine-binding protein n=4 Tax=Clostridiales RepID=E5XJ79_9FIRM
Leucine-binding protein {ECO:0000313|EMBL:EFV18621.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Extracellular ligand-binding receptor
L3_079_000G1_scaffold_108_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8477..13369
DNA (4893bp) protein (1631aa)
F5/8 type C domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C411_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS74395.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_108_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14093..14953)
DNA (861bp) protein (287aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=5 Tax=Clostridiales RepID=A5KJF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26991.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000G1_scaffold_108_10
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14971..15789)
DNA (819bp) protein (273aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=2 Tax=Lachnospiraceae RepID=A5KJF3_9FIRM
L3_079_000G1_scaffold_108_11
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15786..16277)
DNA (492bp) protein (164aa)
HDIG domain-containing protein n=3 Tax=Clostridiales RepID=E5XDC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88968.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_079_000G1_scaffold_108_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16298..16855)
DNA (558bp) protein (186aa)
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
GTP cyclohydrolase 1 n=2 Tax=Clostridiales RepID=D4M1W6_9FIRM
L3_079_000G1_scaffold_108_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16855..18225)
DNA (1371bp) protein (457aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q1N5_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CDC15892.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_079_000G1_scaffold_108_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18417..18794
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=5 Tax=Clostridiales RepID=A5KJE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26996.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator, GntR family
L3_079_000G1_scaffold_108_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18787..19689
DNA (903bp) protein (301aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A5KJE8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDK25451.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
ABC-type multidrug transport system, ATPase component
L3_079_000G1_scaffold_108_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19664..21811
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KJE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25450.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_079_000G1_scaffold_108_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21844..22422)
DNA (579bp) protein (193aa)
BioY family protein n=5 Tax=Clostridiales RepID=A5KQ11_9FIRM
BioY protein {ECO:0000313|EMBL:EFV18622.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000G1_scaffold_108_18
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22659..23837
DNA (1179bp) protein (393aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KUJ1_9FIRM
L3_079_000G1_scaffold_108_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23866..24717
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M691_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26753.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_079_000G1_scaffold_108_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24698..25378
DNA (681bp) protein (227aa)
DnaJ domain protein n=5 Tax=Clostridiales RepID=A5KQ08_9FIRM
DnaJ family Molecular chaperone {ECO:0000313|EMBL:EFV18624.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_079_000G1_scaffold_108_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25369..25902
DNA (534bp) protein (178aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18625.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000G1_scaffold_108_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26391..31310
DNA (4920bp) protein (1640aa)
nanA; sialidase A (neuraminidase A) (EC:3.2.1.18)
F5/8 type C domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C387_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDS74121.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_079_000G1_scaffold_108_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31826..32386
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QLA1_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L3_079_000G1_scaffold_108_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32543..33247
DNA (705bp) protein (235aa)
Cell Wall Hydrolase n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KQ04_9FIRM
Cell Wall Hydrolase {ECO:0000313|EMBL:EDK23496.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Cell Wall Hydrolase.
L3_079_000G1_scaffold_108_25
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33401..34537
DNA (1137bp) protein (379aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D674_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDD85721.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
L3_079_000G1_scaffold_108_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34559..35050
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RGU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19394.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
acetyltransferase
L3_079_000G1_scaffold_108_27
Lodderomyces elongisporus, Lodderomyces, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(35177..36784)
DNA (1608bp) protein (536aa)
Filamentous hemagglutinin family N-terminal domain protein n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2ITM8_RAHAC
Predicted protein {ECO:0000313|EMBL:EDK46247.1}; TaxID=379508 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Lodderomyces.;" source="Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /; NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus).;"
filamentous hemagglutinin family N-terminal domain protein
L3_079_000G1_scaffold_108_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36951..37820)
DNA (870bp) protein (290aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ27112.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000G1_scaffold_108_29
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38009..39286
DNA (1278bp) protein (426aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Enolase n=4 Tax=Clostridiales RepID=E5XJ88_9FIRM
enolase
L3_079_000G1_scaffold_108_30
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39334..39858
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Anaerostipes RepID=B0MDU1_9FIRM
Membrane flanked domain-containing protein {ECO:0000313|EMBL:CDC36576.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
membrane-flanked domain-containing protein
Displaying items 1-30 of 108 in total

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