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L3_079_000G1_scaffold_109

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_109_1
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(209..1471)
DNA (1263bp) protein (421aa)
Uracil permease n=3 Tax=Clostridiales RepID=E5XFI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83048.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
uracil-xanthine permease
L3_079_000G1_scaffold_109_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1538..2509)
DNA (972bp) protein (324aa)
membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=2 Tax=Ruminococcus lactaris RepID=B5CM93_9FIRM
Renal dipeptidase family protein {ECO:0000313|EMBL:EDY33603.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L3_079_000G1_scaffold_109_3
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2644..3345
DNA (702bp) protein (234aa)
Glutamine amidotransferase class-I domain protein n=1 Tax=Clostridium sp. D5 RepID=F0YXL6_9CLOT
Glutamine amidotransferase class-I domain protein {ECO:0000313|EMBL:EGB93704.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Predicted glutamine amidotransferases
L3_079_000G1_scaffold_109_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3451..3633
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YXL5_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93703.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
L3_079_000G1_scaffold_109_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3650..3907
DNA (258bp) protein (86aa)
Coat F domain protein n=4 Tax=Clostridiales RepID=A7B4T9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN47885.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Coat F domain.
L3_079_000G1_scaffold_109_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3991..4656)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JJW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31831.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_079_000G1_scaffold_109_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4716..5495)
DNA (780bp) protein (260aa)
Cof-like hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSJ2_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEA81012.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD family phosphatase
L3_079_000G1_scaffold_109_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5599..5958)
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D713_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF06123.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted membrane protein
L3_079_000G1_scaffold_109_9
unknown

Not on your lists

comp(6011..6193)
DNA (183bp) protein (61aa)

This feature has no annotations

L3_079_000G1_scaffold_109_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6311..6712)
DNA (402bp) protein (134aa)
Acetyltransferase family protein n=53 Tax=Clostridium difficile RepID=T2U910_CLODI
Acetyltransferase family protein {ECO:0000313|EMBL:EQI87812.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative acyl-CoA N-acyltransferase
L3_079_000G1_scaffold_109_11
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6742..7341)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG79333.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
hypothetical protein
L3_079_000G1_scaffold_109_12
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7399..8148)
DNA (750bp) protein (250aa)
Methyltransferase domain protein n=2 Tax=Erysipelotrichaceae RepID=B0N318_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDS18840.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_079_000G1_scaffold_109_13
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8200..8964)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2BHG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ36279.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
putative hydrolase or acyltransferase
L3_079_000G1_scaffold_109_14
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9137..11569)
DNA (2433bp) protein (811aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=4 Tax=Clostridiales RepID=A5KPB9_9FIRM
L3_079_000G1_scaffold_109_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12003..13412)
DNA (1410bp) protein (470aa)
Amino acid carrier protein n=3 Tax=Lachnospiraceae RepID=A7B6S3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16186.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
amino acid carrier protein
L3_079_000G1_scaffold_109_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13690..14472)
DNA (783bp) protein (261aa)
Metal cation transporter, ZIP family n=2 Tax=Ruminococcus lactaris RepID=B5CN19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21856.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
zinc/iron permease
L3_079_000G1_scaffold_109_17
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14579..15004)
DNA (426bp) protein (142aa)
Flavodoxin n=1 Tax=Clostridium sp. D5 RepID=F0YXI3_9CLOT
Flavodoxin {ECO:0000313|EMBL:EGB93671.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
flavodoxin, short chain
L3_079_000G1_scaffold_109_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15025..15615)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C395_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33363.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
hypothetical protein
L3_079_000G1_scaffold_109_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16019..16441
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Ruminococcus lactaris RepID=B5CN16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD21853.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_079_000G1_scaffold_109_20
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

comp(16546..16785)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Streptococcus intermedius RepID=T1ZFL3_STRIT
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_9
L3_079_000G1_scaffold_109_21
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16865..17830)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JED8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32336.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
inner-membrane translocator
L3_079_000G1_scaffold_109_22
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17859..18962)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JDQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32334.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
EppA_BapA family protein
L3_079_000G1_scaffold_109_23
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18989..19942)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JE00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32333.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L3_079_000G1_scaffold_109_24
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19956..21461)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JMH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32332.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC transporter-like protein
L3_079_000G1_scaffold_109_25
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21486..22892)
DNA (1407bp) protein (469aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JED5_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EOS32331.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_079_000G1_scaffold_109_26
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22911..23540)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JDR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32330.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_079_000G1_scaffold_109_27
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23552..24106)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JDP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32329.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_079_000G1_scaffold_109_28
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24149..25150)
DNA (1002bp) protein (334aa)
glucokinase (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JDZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32328.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
L3_079_000G1_scaffold_109_29
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25340..26107
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JMH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32327.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
AraC family transcriptional regulator
L3_079_000G1_scaffold_109_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26174..27844)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B6S8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76190.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying items 1-30 of 112 in total

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