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L3_079_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_112_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..85)
DNA (84bp) protein (28aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium bolteae 90B8 RepID=R0B5R0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40309.1}; Flags: Fragment;; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L3_079_000G1_scaffold_112_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(192..1115)
DNA (924bp) protein (308aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RST4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16281.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
AraC-type DNA-binding domain-containing proteins
L3_079_000G1_scaffold_112_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1283..2479
DNA (1197bp) protein (399aa)
Major facilitator superfamily transporter n=3 Tax=Clostridium RepID=R0A3J4_9CLOT
Major facilitator superfamily transporter {ECO:0000313|EMBL:ENZ46765.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
major facilitator superfamily protein
L3_079_000G1_scaffold_112_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2436..3344
DNA (909bp) protein (303aa)
PHP protein n=3 Tax=Clostridium RepID=N9YWQ2_9CLOT
PHP protein {ECO:0000313|EMBL:ENZ16473.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Predicted metal-dependent phosphoesterases (PHP family)
L3_079_000G1_scaffold_112_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3565..6522
DNA (2958bp) protein (986aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0B5E9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16286.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_079_000G1_scaffold_112_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6733..8367
DNA (1635bp) protein (545aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9ZHY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01144.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
signal transduction histidine kinase
L3_079_000G1_scaffold_112_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8419..9054
DNA (636bp) protein (212aa)
Two-component system response regulator n=4 Tax=Clostridium RepID=N9XM99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01143.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_079_000G1_scaffold_112_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9065..9946)
DNA (882bp) protein (294aa)
GntR family transcriptional regulator n=2 Tax=Clostridium RepID=N9Z8R6_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:ENZ16477.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Predicted regulator for deoxynucleoside utilization, GntR family
L3_079_000G1_scaffold_112_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10032..10943
DNA (912bp) protein (304aa)
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
udp; uridine phosphorylase (EC:2.4.2.3)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RSU5_9CLOT
L3_079_000G1_scaffold_112_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10969..12171
DNA (1203bp) protein (401aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RSU6_9CLOT
NupC family nucleoside transporter {ECO:0000313|EMBL:ENZ16479.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
nucleoside permease nupC
L3_079_000G1_scaffold_112_11
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12184..13401
DNA (1218bp) protein (406aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=2 Tax=Clostridium RepID=N9XMP0_9CLOT
L3_079_000G1_scaffold_112_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13470..14105
DNA (636bp) protein (212aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XMA4_9CLOT
L3_079_000G1_scaffold_112_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14223..15125
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9Z8S3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16482.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_079_000G1_scaffold_112_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15247..15999
DNA (753bp) protein (251aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16483.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_079_000G1_scaffold_112_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16096..16674
DNA (579bp) protein (193aa)
ErfK/YbiS/YcfS/YnhG family protein n=4 Tax=Clostridium RepID=N9Z7K4_9CLOT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ENZ46809.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_079_000G1_scaffold_112_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16885..17148
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZHN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46810.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_079_000G1_scaffold_112_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17335..18660
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F8E3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01133.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
alkaline ceramidase domain-containing protein
L3_079_000G1_scaffold_112_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18753..20210)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8RQZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16959.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Na+/solute symporter
L3_079_000G1_scaffold_112_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20406..21113
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FLS9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01131.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
LytTR family two component transcriptional regulator
L3_079_000G1_scaffold_112_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21121..22425
DNA (1305bp) protein (435aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RQZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16957.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
signal transduction histidine kinase regulating citrate/malate metabolism
L3_079_000G1_scaffold_112_21
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22763..23554
DNA (792bp) protein (264aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RQY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01129.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_079_000G1_scaffold_112_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23567..24790
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F8E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01128.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
probable hydroxymethylpyrimidine transporter CytX
L3_079_000G1_scaffold_112_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24943..25656
DNA (714bp) protein (238aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Clostridium RepID=R0B2V1_9CLOT
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
L3_079_000G1_scaffold_112_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25889..27298
DNA (1410bp) protein (470aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWS1_9CLOT
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ENZ16493.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ErfK/YbiS/YcfS/YnhG family protein
L3_079_000G1_scaffold_112_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27450..28829
DNA (1380bp) protein (460aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=N9Z7L5_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ENZ46819.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
putative efflux protein, MATE family
L3_079_000G1_scaffold_112_26
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28947..30182)
DNA (1236bp) protein (412aa)
SARP family transcriptional regulator n=3 Tax=Clostridium RepID=N9ZHM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01124.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
SARP family transcriptional regulator
L3_079_000G1_scaffold_112_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30378..31238
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9XMC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01123.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_000G1_scaffold_112_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31265..32173
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FK62_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01122.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
sortase
L3_079_000G1_scaffold_112_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32487..33431
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FLS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01121.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
family 3 extracellular solute-binding protein
L3_079_000G1_scaffold_112_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33476..34279
DNA (804bp) protein (268aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=3 Tax=Clostridium RepID=N9Z7L9_9CLOT
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:ENZ16499.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
polar amino acid ABC transporter inner membrane subunit
Displaying items 1-30 of 213 in total

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