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L3_079_000G1_scaffold_140

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Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_140_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(223..780)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQE6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74115.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000G1_scaffold_140_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1017..1553)
DNA (537bp) protein (179aa)
PTS system glucose subfamily IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCI4_9ACTN
PTS system glucose subfamily IIA component {ECO:0000313|EMBL:CDA36570.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Glc family PTS system transporter subunit IIA
L3_079_000G1_scaffold_140_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2138..3310
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ03_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74113.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
filamentation induced by cAMP protein fic
L3_079_000G1_scaffold_140_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3600..4271)
DNA (672bp) protein (224aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Orotate phosphoribosyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED16_9ACTN
orotate phosphoribosyltransferase
L3_079_000G1_scaffold_140_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4709..7477
DNA (2769bp) protein (923aa)
magnesium-translocating P-type ATPase (EC:3.6.3.2)
Magnesium-importing ATPase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2U5_9ACTN
Magnesium-importing ATPase {ECO:0000313|EMBL:CDA35467.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000G1_scaffold_140_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7660..9204)
DNA (1545bp) protein (515aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED18_9ACTN
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EBA38506.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_079_000G1_scaffold_140_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9582..10319
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGD5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35594.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000G1_scaffold_140_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10344..11666
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED20_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38508.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_140_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11715..12956
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED21_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38509.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_140_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13037..13879
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED23_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38510.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_140_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13991..14611)
DNA (621bp) protein (207aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED24_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA38512.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
two-component response regulator
L3_079_000G1_scaffold_140_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14608..16101)
DNA (1494bp) protein (498aa)
two-component sensor histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED25_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EBA38513.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000G1_scaffold_140_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16104..17987)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED26_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38515.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_140_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18157..18801)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED28_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA38516.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_140_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18937..19425)
DNA (489bp) protein (163aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED29_9ACTN
L3_079_000G1_scaffold_140_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19628..20638)
DNA (1011bp) protein (337aa)
Sugar-binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED30_9ACTN
Sugar-binding domain protein {ECO:0000313|EMBL:EBA38518.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LacI family transcriptional regulator
L3_079_000G1_scaffold_140_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20821..22239)
DNA (1419bp) protein (473aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EBA38520.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EBA38520.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED32_9ACTN
L3_079_000G1_scaffold_140_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22386..23834)
DNA (1449bp) protein (483aa)
Phosphotransferase system, EIIB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED33_9ACTN
Phosphotransferase system, EIIB {ECO:0000313|EMBL:EBA38521.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS fructose transporter subunit IIB
L3_079_000G1_scaffold_140_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23905..24744)
DNA (840bp) protein (280aa)
Cryptic beta-glucoside bgl operon antiterminator n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED34_9ACTN
Cryptic beta-glucoside bgl operon antiterminator {ECO:0000313|EMBL:EBA38522.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
beta-glucoside operon antiterminator
L3_079_000G1_scaffold_140_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24994..25968)
DNA (975bp) protein (325aa)
inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.3)
Inosine-uridine preferring nucleoside hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6Q7_9ACTN
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:CDA35403.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000G1_scaffold_140_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25999..26961)
DNA (963bp) protein (321aa)
Putative ribokinase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZFR8_9ACTN
Putative ribokinase {ECO:0000313|EMBL:CDA35404.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sugar kinase, ribokinase
L3_079_000G1_scaffold_140_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27148..29364
DNA (2217bp) protein (739aa)
Acyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED37_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74098.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
peptidoglycan-N-acetylmuramate O-acetyltransferase
L3_079_000G1_scaffold_140_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29909..31171)
DNA (1263bp) protein (421aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBI8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74097.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
natural resistance-associated macrophage protein
L3_079_000G1_scaffold_140_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31180..33006)
DNA (1827bp) protein (609aa)
Putative magnesium transporter n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8P7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74096.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
MgtE integral membrane protein
L3_079_000G1_scaffold_140_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33399..34805)
DNA (1407bp) protein (469aa)
Polysaccharide deacetylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBJ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74095.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
polysaccharide deacetylase
L3_079_000G1_scaffold_140_26
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34878..35633)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z7M6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35693.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000G1_scaffold_140_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35633..36022)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGK8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35694.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000G1_scaffold_140_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(36159..36992)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBJ6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI74092.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000G1_scaffold_140_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37017..38390)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGD2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35589.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000G1_scaffold_140_30
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(38499..39182)
DNA (684bp) protein (228aa)
Channel protein, hemolysin III family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBJ8_9ACTN
Channel protein, hemolysin III family {ECO:0000313|EMBL:EBA38958.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hemolysin III family channel protein
Displaying items 1-30 of 93 in total

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