ggKbase home page

L3_079_000G1_scaffold_155

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_155_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(65..277)
DNA (213bp) protein (71aa)
Uncharacterized conserved protein n=2 Tax=Clostridium RepID=D6DK70_CLOSC
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK78094.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

422..763
DNA (342bp) protein (114aa)
Transcriptional regulator, MarR family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK69_CLOSC
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CBK78093.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_3
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

989..2005
DNA (1017bp) protein (339aa)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZEX8_9CLOT
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDD39501.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
endoglucanase
L3_079_000G1_scaffold_155_4
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2272..3087)
DNA (816bp) protein (272aa)
ABC-type sugar transport system, permease component n=2 Tax=Clostridiales RepID=D4MQC1_9FIRM
ABC-type sugar transport system, permease component
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:CBL35957.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_000G1_scaffold_155_5
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3089..3952)
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLM1_9CLOT
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CCY86176.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_079_000G1_scaffold_155_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3988..5280)
DNA (1293bp) protein (431aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK66_CLOSC
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBK78090.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_7
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5632..8637
DNA (3006bp) protein (1002aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613, ECO:0000313|EMBL:CBL35471.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MNY5_9FIRM
L3_079_000G1_scaffold_155_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8716..9720
DNA (1005bp) protein (335aa)
Transcriptional regulators n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK64_CLOSC
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBK78088.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_9
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9958..11070
DNA (1113bp) protein (371aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Clostridium RepID=D6DK63_CLOSC
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK78087.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_10
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11255..11455
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5MME6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL35472.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_000G1_scaffold_155_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11507..12655
DNA (1149bp) protein (383aa)
von Willebrand factor type A domain protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M3V4_9CLOT
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CCY86183.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_155_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12704..13807
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5M9A9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86184.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_155_13
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13896..14615
DNA (720bp) protein (240aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4CEJ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86185.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_155_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14632..16677
DNA (2046bp) protein (682aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK59_CLOSC
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBK78083.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L3_079_000G1_scaffold_155_15
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16652..17329
DNA (678bp) protein (226aa)
Predicted phosphoesterases, related to the Icc protein n=2 Tax=Clostridium RepID=D6DK58_CLOSC
Predicted phosphoesterases, related to the Icc protein
Predicted phosphoesterases, related to the Icc protein {ECO:0000313|EMBL:CBK78082.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17553..18833
DNA (1281bp) protein (427aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CBK78081.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CBK78081.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
O-acetylhomoserine sulfhydrolase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK57_CLOSC
L3_079_000G1_scaffold_155_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18980..20530
DNA (1551bp) protein (517aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes {ECO:0000313|EMBL:CBK78080.1}; EC=2.7.8.- {ECO:0000313|EMBL:CBK78080.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes n=2 Tax=Clostridium RepID=D6DK56_CLOSC
L3_079_000G1_scaffold_155_18
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20641..21498
DNA (858bp) protein (286aa)
Predicted esterase of the alpha-beta hydrolase superfamily n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK55_CLOSC
Predicted esterase of the alpha-beta hydrolase superfamily
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:CBK78079.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_155_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21616..22608
DNA (993bp) protein (331aa)
Zn-dependent dipeptidase, microsomal dipeptidase homolog (EC:3.4.13.19)
Zn-dependent dipeptidase, microsomal dipeptidase homolog {ECO:0000313|EMBL:CBK78078.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CBK78078.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Zn-dependent dipeptidase, microsomal dipeptidase homolog n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK54_CLOSC
L3_079_000G1_scaffold_155_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22703..24364
DNA (1662bp) protein (554aa)
Na/Pi-cotransporter n=3 Tax=Clostridium RepID=D6DK53_CLOSC
Na/Pi-cotransporter {ECO:0000313|EMBL:CBK78077.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Na/Pi-cotransporter
L3_079_000G1_scaffold_155_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24366..25052
DNA (687bp) protein (229aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Clostridium RepID=D6DK52_CLOSC
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY86193.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_155_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25095..26537
DNA (1443bp) protein (481aa)
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK78075.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=2 Tax=Clostridium RepID=D6DK51_CLOSC
L3_079_000G1_scaffold_155_23
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26512..27084)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6Z0H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD39705.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L3_079_000G1_scaffold_155_24
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27310..28512
DNA (1203bp) protein (401aa)
ABC-type uncharacterized transport system, periplasmic component n=3 Tax=Clostridium RepID=D6DK50_CLOSC
ABC transporter substrate binding protein {ECO:0000313|EMBL:EFE11869.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type uncharacterized transport system, periplasmic component
L3_079_000G1_scaffold_155_25
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28514..29434
DNA (921bp) protein (307aa)
ABC-type uncharacterized transport system, permease component n=4 Tax=Clostridiales RepID=D4MNZ1_9FIRM
ABC-type uncharacterized transport system, permease component
ABC-type uncharacterized transport system permease component {ECO:0000313|EMBL:CCY87235.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_155_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29428..30225
DNA (798bp) protein (266aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=D4CEL3_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY87233.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ABC transporter
L3_079_000G1_scaffold_155_27
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30565..32394
DNA (1830bp) protein (610aa)
SH3 domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CEL5_9CLOT
SH3 domain protein {ECO:0000313|EMBL:EFE11873.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
NLP/P60 protein
L3_079_000G1_scaffold_155_28
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32646..34334
DNA (1689bp) protein (563aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=3 Tax=Clostridium RepID=D6DK46_CLOSC
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CCY80946.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_079_000G1_scaffold_155_29
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34465..35577)
DNA (1113bp) protein (371aa)
[citrate (pro-3S)-lyase] ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:CBK78069.1}; EC=6.2.1.22 {ECO:0000313|EMBL:CBK78069.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DK45_CLOSC
L3_079_000G1_scaffold_155_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35852..36640
DNA (789bp) protein (263aa)
Putative endopeptidase Clp n=1 Tax=Clostridium sp. M62/1 RepID=D4CEL9_9CLOT
Putative endopeptidase Clp {ECO:0000313|EMBL:EFE11877.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Protease subunit of ATP-dependent Clp proteases
Displaying items 1-30 of 86 in total

View Taxonomy