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L3_079_000G1_scaffold_158

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Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_158_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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172..1974
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V5_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39623.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_079_000G1_scaffold_158_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2038..2703
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=2 Tax=Collinsella RepID=A4E9V4_9ACTN
L3_079_000G1_scaffold_158_3
unknown

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2822..3889
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B3F8BF
hypothetical protein
L3_079_000G1_scaffold_158_4
Olsenella profusa, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4093..5571
DNA (1479bp) protein (493aa)
Circularly permuted ATP-grasp type 2 n=1 Tax=Olsenella profusa F0195 RepID=U2TU12_9ACTN
Circularly permuted ATP-grasp type 2 {ECO:0000313|EMBL:ERL09830.1}; TaxID=1125712 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella profusa F0195.;"
hypothetical protein
L3_079_000G1_scaffold_158_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5795..9427
DNA (3633bp) protein (1211aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN
transcription-repair coupling factor
L3_079_000G1_scaffold_158_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9515..10378
DNA (864bp) protein (288aa)
PAP2 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71764.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
PAP2 superfamily protein
L3_079_000G1_scaffold_158_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10424..11449
DNA (1026bp) protein (342aa)
Threonine aldolase (EC:4.1.2.5)
Beta-eliminating lyase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V1_9ACTN
Beta-eliminating lyase {ECO:0000313|EMBL:EBA39619.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000G1_scaffold_158_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11527..12108
DNA (582bp) protein (194aa)
Acetyltransferase, GNAT family n=2 Tax=Collinsella RepID=A4E9V0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71766.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sortase-like acyltransferase
L3_079_000G1_scaffold_158_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12156..12878)
DNA (723bp) protein (241aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Collinsella RepID=A4E9U9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75726.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_079_000G1_scaffold_158_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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13084..13404
DNA (321bp) protein (107aa)
SIS domain protein n=2 Tax=Collinsella RepID=A4E9U8_9ACTN
SIS domain protein {ECO:0000313|EMBL:CDA36295.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sugar isomerase (SIS)
L3_079_000G1_scaffold_158_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13377..13976
DNA (600bp) protein (200aa)
SIS domain protein n=2 Tax=Collinsella RepID=A4E9U8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75727.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sugar isomerase (SIS)
L3_079_000G1_scaffold_158_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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14379..15461
DNA (1083bp) protein (361aa)
Putative membrane protein n=2 Tax=Collinsella RepID=R5ZI65_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36294.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transporter
L3_079_000G1_scaffold_158_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15645..16568
DNA (924bp) protein (308aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system fructose IIA component n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9B9_9ACTN
PTS system fructose IIA component {ECO:0000313|EMBL:CDA36293.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_079_000G1_scaffold_158_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16605..17399
DNA (795bp) protein (265aa)
PTS system sorbose-specific iic component n=1 Tax=Collinsella sp. CAG:166 RepID=R6A585_9ACTN
PTS system sorbose-specific iic component {ECO:0000313|EMBL:CDA36292.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_079_000G1_scaffold_158_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17413..18246
DNA (834bp) protein (278aa)
PTS system mannose/fructose/sorbose family IID component n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPH9_9ACTN
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDA36291.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
PTS system IID component, Man family (TC 4.A.6)
L3_079_000G1_scaffold_158_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18446..19429
DNA (984bp) protein (328aa)
SIS domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBM0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75732.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted phosphosugar isomerases
L3_079_000G1_scaffold_158_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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19589..20218
DNA (630bp) protein (210aa)
HAD hydrolase family IA variant 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI61_9ACTN
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDA36289.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_079_000G1_scaffold_158_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20573..21580
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5Z9B5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36288.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000G1_scaffold_158_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21801..22520
DNA (720bp) protein (240aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A582_9ACTN
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:CDA36287.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Transcriptional regulators
L3_079_000G1_scaffold_158_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22854..24836
DNA (1983bp) protein (661aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
Putative ATP-dependent DNA helicase RecQ n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T7_9ACTN
Putative ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EBA39605.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000G1_scaffold_158_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24839..25594
DNA (756bp) protein (252aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75663.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GntR family transcriptional regulator
L3_079_000G1_scaffold_158_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25739..26707
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB83_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36085.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
sugar isomerase
L3_079_000G1_scaffold_158_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26892..27869)
DNA (978bp) protein (326aa)
malate dehydrogenase (NAD) (EC:1.1.1.37)
Putative L-lactate dehydrogenase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75666.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000G1_scaffold_158_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28081..29007
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T3_9ACTN
homoserine O-succinyltransferase
L3_079_000G1_scaffold_158_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29451..30413
DNA (963bp) protein (321aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39599.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000G1_scaffold_158_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30581..31177)
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T0_9ACTN
L3_079_000G1_scaffold_158_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31324..31653)
DNA (330bp) protein (110aa)
HicB family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB87_9ACTN
HicB family protein {ECO:0000313|EMBL:CDA36090.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hicB family protein
L3_079_000G1_scaffold_158_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32226..35270)
DNA (3045bp) protein (1015aa)
Peptidase M16 inactive domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNZ9_9ACTN
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDA36091.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Peptidase M16C associated domain-containing protein
L3_079_000G1_scaffold_158_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35675..37141
DNA (1467bp) protein (489aa)
Divergent AAA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIK8_9ACTN
Divergent AAA domain protein {ECO:0000313|EMBL:CDA36444.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator
L3_079_000G1_scaffold_158_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37242..37733)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75672.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying items 1-30 of 152 in total

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