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L3_079_000G1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_160_1
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

153..761
DNA (609bp) protein (203aa)
DNA-binding helix-turn-helix protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JUX1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE67775.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
Predicted transcriptional regulators
L3_079_000G1_scaffold_160_2
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

876..1067
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Enterococcus faecium RepID=D0AFC7_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EEW65943.1}; TaxID=565666 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TC 6.;"
L3_079_000G1_scaffold_160_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1131..1655)
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YIG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57267.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Predicted Zn peptidase
L3_079_000G1_scaffold_160_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1736..2167)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AN78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG90006.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Helix-turn-helix.
L3_079_000G1_scaffold_160_5
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2460..3731
DNA (1272bp) protein (424aa)
ImpB/MucB/SamB family protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSX0_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EDM87194.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_079_000G1_scaffold_160_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3748..4161
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y4W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57270.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_079_000G1_scaffold_160_7
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4387..4632
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=root RepID=S2XZ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57271.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_079_000G1_scaffold_160_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5032..5667
DNA (636bp) protein (212aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9F5_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EEC90593.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
RNA polymerase sigma factor, sigma-70 family
L3_079_000G1_scaffold_160_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6115..12063
DNA (5949bp) protein (1983aa)
Cna protein B-type domain n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LV84_9FIRM
Cna protein B-type domain {ECO:0000313|EMBL:CBL24692.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Cna protein B-type domain.
L3_079_000G1_scaffold_160_10

Not on your lists

12414..12971
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9D905_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX09311.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_079_000G1_scaffold_160_11
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12968..14779
DNA (1812bp) protein (604aa)
Type IV secretory pathway, VirD4 components n=1 Tax=Coprococcus catus GD/7 RepID=D4JA55_9FIRM
Type IV secretory pathway, VirD4 components
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBK81226.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L3_079_000G1_scaffold_160_12
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15275..16147
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XYH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57278.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_079_000G1_scaffold_160_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16172..16561
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87208.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_079_000G1_scaffold_160_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16542..18998
DNA (2457bp) protein (819aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87209.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_079_000G1_scaffold_160_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19023..21317
DNA (2295bp) protein (765aa)
NlpC/P60 family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9A9_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEC90686.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_079_000G1_scaffold_160_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21333..21641
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9A8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90685.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_079_000G1_scaffold_160_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21622..22347
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90684.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_079_000G1_scaffold_160_18
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22413..24527
DNA (2115bp) protein (705aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZSZ0_9FIRM
L3_079_000G1_scaffold_160_19
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24540..25610
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=S2YIH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89998.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_079_000G1_scaffold_160_20
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25682..27631
DNA (1950bp) protein (650aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XYI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89997.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Domain of unknown function (DUF1738).
L3_079_000G1_scaffold_160_21
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27628..27888
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YZQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89996.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_079_000G1_scaffold_160_22
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27878..28744
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y4Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89995.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L3_079_000G1_scaffold_160_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28884..29159
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FPE2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82077.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_079_000G1_scaffold_160_24
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29264..29566)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RXD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74092.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Helix-turn-helix.
L3_079_000G1_scaffold_160_25
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29648..30061)
DNA (414bp) protein (138aa)
dUTPase (EC:3.6.1.23)
Uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RXD2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74091.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_079_000G1_scaffold_160_26
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30058..30825)
DNA (768bp) protein (256aa)
thymidylate synthase (FAD) (EC:2.1.1.148)
Thymidylate synthase (FAD) n=2 Tax=Lachnospiraceae RepID=D4JA91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87239.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_079_000G1_scaffold_160_27
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30812..31138)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6C9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14117.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_079_000G1_scaffold_160_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31135..32790)
DNA (1656bp) protein (552aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NC83_CLOSV
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDS07902.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Relaxase/Mobilisation nuclease domain.
L3_079_000G1_scaffold_160_29
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32759..33154)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AEA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83985.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L3_079_000G1_scaffold_160_30
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33426..33821
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=F3AEL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30477.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
DNA binding domain, excisionase family
Displaying items 1-30 of 77 in total

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