ggKbase home page

L3_079_000G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_169_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(609..2069)
DNA (1461bp) protein (487aa)
Stage IV sporulation protein A n=1 Tax=Clostridium sp. D5 RepID=F0Z4Q6_9CLOT
Stage IV sporulation protein A {ECO:0000313|EMBL:EGB91072.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
stage IV sporulation protein A
L3_079_000G1_scaffold_169_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2147..3160)
DNA (1014bp) protein (338aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
glycerol 3-phosphate dehydrogenase (NAD(P)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=5 Tax=root RepID=A5KQ66_9FIRM
L3_079_000G1_scaffold_169_3

Not on your lists

comp(3180..3836)
DNA (657bp) protein (219aa)
Glycerol-3-phosphate acyltransferase n=6 Tax=root RepID=A5KQ67_9FIRM
Acyl-phosphate glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:EKC64204.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
acyl-phosphate glycerol-3-phosphate acyltransferase
L3_079_000G1_scaffold_169_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3841..5169)
DNA (1329bp) protein (443aa)
GTPase Der n=5 Tax=Clostridiales RepID=A5KQ68_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
ribosome-associated GTPase EngA
L3_079_000G1_scaffold_169_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5197..6522)
DNA (1326bp) protein (442aa)
PDZ domain-containing protein n=5 Tax=Clostridiales RepID=E5XEU1_9FIRM
Putative FeS-containing Cyanobacterial-specific oxidoreductase {ECO:0000313|EMBL:EDK23411.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Fe-S oxidoreductase, related to NifB/MoaA family
L3_079_000G1_scaffold_169_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6764..7945
DNA (1182bp) protein (394aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=5 Tax=Clostridiales RepID=A5KQ70_9FIRM
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:EFV20281.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000G1_scaffold_169_7
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8096..8590)
DNA (495bp) protein (165aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0Z4Q0_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB91066.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Protein of unknown function (DUF1653).
L3_079_000G1_scaffold_169_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8665..9879)
DNA (1215bp) protein (405aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase n=4 Tax=Clostridiales RepID=A5KQ71_9FIRM
Threonine ammonia-lyase {ECO:0000313|EMBL:EFV20282.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000G1_scaffold_169_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9908..10858)
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=5 Tax=Clostridiales RepID=A5KQ72_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
signal recognition particle-docking protein FtsY
L3_079_000G1_scaffold_169_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10877..14437)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=2 Tax=unclassified Lachnospiraceae RepID=E5XEU5_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
condensin subunit Smc
L3_079_000G1_scaffold_169_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14450..15139)
DNA (690bp) protein (230aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridium sp. D5 RepID=F0Z4P6_9CLOT
L3_079_000G1_scaffold_169_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15203..15460)
DNA (258bp) protein (86aa)
Phosphate acyltransferase n=4 Tax=Clostridiales RepID=F7JVN0_9FIRM
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L3_079_000G1_scaffold_169_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15457..16563)
DNA (1107bp) protein (369aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Phosphate acyltransferase n=5 Tax=Clostridiales RepID=A5KQ76_9FIRM
phosphate:acyl-[acyl carrier protein] acyltransferase
L3_079_000G1_scaffold_169_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16779..17138)
DNA (360bp) protein (120aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QVS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20289.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L3_079_000G1_scaffold_169_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17315..18511)
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=5 Tax=Clostridiales RepID=A5KQ79_9FIRM
L3_079_000G1_scaffold_169_16
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18562..19560)
DNA (999bp) protein (333aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=5 Tax=Clostridiales RepID=A5KQ80_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:EGG84316.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L3_079_000G1_scaffold_169_17
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19710..21062)
DNA (1353bp) protein (451aa)
Magnesium transporter n=5 Tax=Clostridiales RepID=A5KQ81_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
magnesium transporter
L3_079_000G1_scaffold_169_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21163..22452
DNA (1290bp) protein (430aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQ82_9FIRM
UPF0348 protein HMPREF1026_00659 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted nucleotidyltransferase
L3_079_000G1_scaffold_169_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22462..23157)
DNA (696bp) protein (232aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KR07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26614.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L3_079_000G1_scaffold_169_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23258..24655)
DNA (1398bp) protein (466aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=5 Tax=Clostridiales RepID=A5KR05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20451.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_079_000G1_scaffold_169_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24655..25542)
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Ferredoxin--NADP+ reductase, subunit alpha n=5 Tax=Clostridiales RepID=A5KR04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26616.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_079_000G1_scaffold_169_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25690..26880)
DNA (1191bp) protein (397aa)
NADPH-dependent butanol dehydrogenase {ECO:0000313|EMBL:EDK23148.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EDK23148.1};; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
NADPH-dependent butanol dehydrogenase n=5 Tax=Clostridiales RepID=A5KR03_9FIRM
Alcohol dehydrogenase, class IV
L3_079_000G1_scaffold_169_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27009..28373)
DNA (1365bp) protein (455aa)
Tetratricopeptide repeat protein n=5 Tax=Clostridiales RepID=A5KR02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20448.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Tetratricopeptide repeat.
L3_079_000G1_scaffold_169_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28370..29224)
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZK5_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_079_000G1_scaffold_169_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29245..30915)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=4 Tax=Lachnospiraceae RepID=A5KR00_9FIRM
L3_079_000G1_scaffold_169_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30961..33543)
DNA (2583bp) protein (861aa)
FtsK/SpoIIIE family protein n=5 Tax=Clostridiales RepID=A5KQZ9_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EDK23144.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
DNA translocase FtsK
L3_079_000G1_scaffold_169_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33588..34370)
DNA (783bp) protein (261aa)
Translocation-enhancing protein TepA n=5 Tax=Clostridiales RepID=E5XE11_9FIRM
Translocation-enhancing protein TepA {ECO:0000313|EMBL:EFV20444.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Protease subunit of ATP-dependent Clp proteases
L3_079_000G1_scaffold_169_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34778..35974)
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=5 Tax=Clostridiales RepID=A5KQ84_9FIRM
L3_079_000G1_scaffold_169_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36024..36689)
DNA (666bp) protein (222aa)
FCD domain protein n=5 Tax=Clostridiales RepID=A5KQ85_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26312.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator, GntR family
L3_079_000G1_scaffold_169_30
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36721..38109)
DNA (1389bp) protein (463aa)
HMGL-like protein n=4 Tax=Clostridiales RepID=A7AZ69_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66213.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Isopropylmalate/homocitrate/citramalate synthases
Displaying items 1-30 of 198 in total

View Taxonomy