ggKbase home page

L3_079_000G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 175 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_181_1
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

132..1121
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3EMF6_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KFI88133.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_2
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1290..1658)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RBB4_9BIFI
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:KFI88135.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_3
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1655..2152)
DNA (498bp) protein (166aa)
Nucleotidyltransferase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4V0_9BIFI
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KFI61786.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
nucleotidyltransferase
L3_079_000G1_scaffold_181_4
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2273..2851)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R6Z2Q8_9ACTN
N-acetyltransferase GCN5 {ECO:0000313|EMBL:KFI88137.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
N-acetyltransferase GCN5
L3_079_000G1_scaffold_181_5
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2973..4103
DNA (1131bp) protein (377aa)
Glycerate kinase {ECO:0000313|EMBL:KFI88138.1}; EC=2.7.1.31 {ECO:0000313|EMBL:KFI88138.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
glxK; glycerate kinase (EC:2.7.1.31)
GlxK Glycerate kinase n=4 Tax=Bifidobacterium dentium RepID=D2QB02_BIFDB
L3_079_000G1_scaffold_181_6
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4100..5014)
DNA (915bp) protein (305aa)
Carbon-nitrogen family hydrolase {ECO:0000313|EMBL:KFI83426.1}; EC=3.5.1.53 {ECO:0000313|EMBL:KFI83426.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVX6_9FIRM
carbon-nitrogen family hydrolase
L3_079_000G1_scaffold_181_7
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5032..5337)
DNA (306bp) protein (102aa)
Plasmid maintenance system antidote protein n=2 Tax=Gardnerella vaginalis RepID=I4M1K8_GARVA
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:KFI61782.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
plasmid maintenance system antidote protein
L3_079_000G1_scaffold_181_8
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5309..5596)
DNA (288bp) protein (96aa)
Killer protein n=2 Tax=Gardnerella vaginalis RepID=I4M1K9_GARVA
higB; toxin HigB-1
Killer protein {ECO:0000313|EMBL:EIK78372.1}; TaxID=698952 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 0288E.;"
L3_079_000G1_scaffold_181_9
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6247..6774)
DNA (528bp) protein (176aa)
Appr-1-p processing protein {ECO:0000313|EMBL:KFI61780.1}; EC=2.4.2.30 {ECO:0000313|EMBL:KFI61780.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4R1X4_BIFLM
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_079_000G1_scaffold_181_10
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6813..8888)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8F5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI61779.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
hypothetical protein
L3_079_000G1_scaffold_181_11
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9223..10191)
DNA (969bp) protein (323aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B3DS38_BIFLD
Uncharacterized protein {ECO:0000313|EMBL:KFI83421.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_181_12
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10340..11914)
DNA (1575bp) protein (525aa)
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:KFI61777.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KFI61777.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
dnaQ; dnaQ DNA polymerase III alpha subunit (EC:2.7.7.7)
BRCA1 C-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5T1_9BIFI
L3_079_000G1_scaffold_181_13
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12112..12855
DNA (744bp) protein (248aa)
Uncharacterized protein n=3 Tax=Bifidobacterium bifidum RepID=U2CDK9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI88155.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_14
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12881..13186)
DNA (306bp) protein (102aa)
Putative RNA-binding protein, YhbY family n=2 Tax=Bifidobacterium RepID=A7A7Z8_BIFAD
CRS1 / YhbY domain protein {ECO:0000313|EMBL:KFI83418.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
RNA-binding protein
L3_079_000G1_scaffold_181_15
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13433..14176
DNA (744bp) protein (248aa)
TENA/THI-4 family protein {ECO:0000313|EMBL:KFI83417.1}; EC=3.5.99.2 {ECO:0000313|EMBL:KFI83417.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
tenA; transcriptional activator tenA (EC:2.5.1.3)
TENA/THI-4 family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5W8_9BIFI
L3_079_000G1_scaffold_181_16
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14290..14853)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VI72_9FIRM
Immune inhibitor A {ECO:0000313|EMBL:KFI83416.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_181_17
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14898..15263)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=F6C9X2_BIFBA
Putative membrane protein {ECO:0000313|EMBL:KFI88159.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_18
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15455..17779)
DNA (2325bp) protein (775aa)
ATPase component of ABC-type transport system {ECO:0000313|EMBL:KFI61771.1}; EC=3.6.3.25 {ECO:0000313|EMBL:KFI61771.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Cobalt transport protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWS1_BIFLN
ABC transporter ATP-binding protein
L3_079_000G1_scaffold_181_19
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17791..18399)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BTY0_9BIFI
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
membrane spanning protein
L3_079_000G1_scaffold_181_20
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18606..19709
DNA (1104bp) protein (368aa)
Glycosyltransferase group 2 family protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GN33_9BIFI
Glycosyltransferase {ECO:0000313|EMBL:KFI61769.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
putative glycosyltransferase
L3_079_000G1_scaffold_181_21
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19696..20559)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU05_BIFLN
Nitroreductase {ECO:0000313|EMBL:KFI88163.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_22
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20718..21482
DNA (765bp) protein (255aa)
Polyphosphate glucokinase {ECO:0000313|EMBL:KFI61767.1}; EC=2.7.1.63 {ECO:0000313|EMBL:KFI61767.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Polyphosphate glucokinase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4REV9_9BIFI
polyphosphate glucokinase
L3_079_000G1_scaffold_181_23
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21502..22923
DNA (1422bp) protein (474aa)
Aminotransferase {ECO:0000313|EMBL:KFI61766.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KFI61766.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Aspartate/tyrosine/aromatic aminotransferase n=10 Tax=Bifidobacterium longum RepID=D6DBD9_BIFLN
aminotransferase
L3_079_000G1_scaffold_181_24
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22963..23766)
DNA (804bp) protein (268aa)
Cobalt/nickel transport system, ATP-binding protein {ECO:0000313|EMBL:KFI83408.1}; EC=3.6.3.28 {ECO:0000313|EMBL:KFI83408.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Cobalt/nickel transport system, ATP-binding protein n=5 Tax=Bifidobacterium RepID=E3EPY5_BIFBS
cobalt/nickel transport system, ATP-binding protein
L3_079_000G1_scaffold_181_25
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23818..25488)
DNA (1671bp) protein (557aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XUE8_9BIFI
Putative lipoprotein {ECO:0000313|EMBL:KFI88167.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
arylsulfate sulfotransferase
L3_079_000G1_scaffold_181_26
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25608..27677)
DNA (2070bp) protein (690aa)
glycosyltransferase n=1 Tax=Bifidobacterium bifidum RepID=UPI000373AF87
Putative PMT family glycosyl transferase {ECO:0000313|EMBL:KFI88168.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_27
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27779..31159
DNA (3381bp) protein (1127aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q5X8_9BIFI
Putative tetratricopeptide repeat-containing domain protein {ECO:0000313|EMBL:KFI88169.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_181_28
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31248..31739
DNA (492bp) protein (164aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=2 Tax=Bifidobacterium dentium RepID=D2QAV7_BIFDB
L3_079_000G1_scaffold_181_29
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31721..33877
DNA (2157bp) protein (719aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
DNA ligase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GW20_BIFLN
DNA ligase
L3_079_000G1_scaffold_181_30
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34004..35692
DNA (1689bp) protein (563aa)
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:KFI61760.1}; EC=1.8.1.14 {ECO:0000313|EMBL:KFI61760.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CNN8_CLOPF
pyridine nucleotide-disulphide oxidoreductase family protein
Displaying items 1-30 of 175 in total

View Taxonomy