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L3_079_000G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_184_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(182..451)
DNA (270bp) protein (90aa)
30S ribosomal protein S18 n=18 Tax=Clostridiales RepID=A8RXV2_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
SSU ribosomal protein S18P
L3_079_000G1_scaffold_184_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(489..953)
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=8 Tax=Clostridium RepID=A8RXV1_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
single-strand binding protein
L3_079_000G1_scaffold_184_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1003..1290)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=7 Tax=Clostridium RepID=A8RXV0_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
SSU ribosomal protein S6P
L3_079_000G1_scaffold_184_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1459..1662)
DNA (204bp) protein (68aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XP87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ46069.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_079_000G1_scaffold_184_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1704..2696)
DNA (993bp) protein (331aa)
Oxidoreductase n=2 Tax=Clostridium RepID=N9Z971_9CLOT
Oxidoreductase {ECO:0000313|EMBL:ENZ17009.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
aldo/keto reductase
L3_079_000G1_scaffold_184_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2715..3437)
DNA (723bp) protein (241aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YY92_9CLOT
L3_079_000G1_scaffold_184_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3514..4641)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9ZAB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17007.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_079_000G1_scaffold_184_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4638..5549)
DNA (912bp) protein (304aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RXU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00207.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_000G1_scaffold_184_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5724..7337)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=6 Tax=Clostridium bolteae RepID=A8RXU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14408.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
LysM domain.
L3_079_000G1_scaffold_184_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7410..8282)
DNA (873bp) protein (291aa)
ATPase n=1 Tax=Clostridium bolteae 90B8 RepID=R0BMT9_9CLOT
ATPase {ECO:0000313|EMBL:ENZ45572.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L3_079_000G1_scaffold_184_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8309..8959)
DNA (651bp) protein (217aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=3 Tax=Clostridium RepID=N9YY87_9CLOT
L3_079_000G1_scaffold_184_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9139..9564)
DNA (426bp) protein (142aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9ZAA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00203.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_079_000G1_scaffold_184_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9691..10716)
DNA (1026bp) protein (342aa)
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=3 Tax=Clostridium RepID=N9XNS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00202.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_079_000G1_scaffold_184_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10950..11543
DNA (594bp) protein (198aa)
TetR family transcriptional regulator n=4 Tax=Clostridium RepID=N9XP76_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ENZ46059.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
TetR family transcriptional regulator
L3_079_000G1_scaffold_184_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11777..13312
DNA (1536bp) protein (512aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RXT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14400.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
SSS sodium solute transporter superfamily protein
L3_079_000G1_scaffold_184_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13445..13720)
DNA (276bp) protein (92aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RXT2_9CLOT
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:ENZ16998.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
sporulation transcriptional regulator SpoIIID
L3_079_000G1_scaffold_184_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13866..15743)
DNA (1878bp) protein (626aa)
2-aminoethylphosphonate-pyruvate transaminase n=2 Tax=Clostridium bolteae RepID=R0A211_9CLOT
2-aminoethylphosphonate-pyruvate transaminase {ECO:0000313|EMBL:ENZ46056.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_079_000G1_scaffold_184_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15842..18469)
DNA (2628bp) protein (876aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XNS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16996.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC-type Fe3+ transport system, permease component
L3_079_000G1_scaffold_184_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18492..19277)
DNA (786bp) protein (262aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding protein n=2 Tax=Clostridium bolteae RepID=R0B5H0_9CLOT
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ46054.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_079_000G1_scaffold_184_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19507..20415)
DNA (909bp) protein (303aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z955_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16994.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator, RpiR family
L3_079_000G1_scaffold_184_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20766..22184)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YY79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16993.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hydroxyacid dehydrogenase/reductase-like protein
L3_079_000G1_scaffold_184_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22203..23015)
DNA (813bp) protein (271aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RXS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ45584.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_079_000G1_scaffold_184_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23048..23401)
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0A1L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00192.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
mannose-6-phosphate isomerase
L3_079_000G1_scaffold_184_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23501..24238)
DNA (738bp) protein (246aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8RXR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14389.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transcriptional regulator
L3_079_000G1_scaffold_184_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24403..25674)
DNA (1272bp) protein (424aa)
TRAP transporter, DctM subunit n=4 Tax=Clostridium RepID=N9Z949_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:ENZ16989.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
TRAP transporter subunit DctM
L3_079_000G1_scaffold_184_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25676..26158)
DNA (483bp) protein (161aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RXR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14387.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_079_000G1_scaffold_184_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26169..27188)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8RXR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00188.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate family transporter subunit DctP
L3_079_000G1_scaffold_184_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27360..28031)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FHD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00187.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
aspartate racemase
L3_079_000G1_scaffold_184_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28252..29865)
DNA (1614bp) protein (538aa)
mannitol 2-dehydrogenase (EC:1.1.1.67)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FJ16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00186.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_079_000G1_scaffold_184_30
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29885..31168)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F568_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00185.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate transporter subunit DctM
Displaying items 1-30 of 97 in total

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