ggKbase home page

L3_079_000G1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_247_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(710..1249)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIF6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48579.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Protein of unknown function (DUF2500).
L3_079_000G1_scaffold_247_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1381..1629
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKU7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16938.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000G1_scaffold_247_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1826..2695)
DNA (870bp) protein (290aa)
Small conductance mechanosensitive channel n=2 Tax=Bacteroides stercoris RepID=S3YGA1_BACSE
Small conductance mechanosensitive channel {ECO:0000313|EMBL:EPH22014.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
MscS Mechanosensitive ion channel
L3_079_000G1_scaffold_247_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2948..5167
DNA (2220bp) protein (740aa)
Iron complex outermembrane recepter protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZMV9_BACSE
Iron complex outermembrane recepter protein {ECO:0000313|EMBL:EPH22015.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
putative TonB-dependent transmembrane receptor protein
L3_079_000G1_scaffold_247_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5176..5793
DNA (618bp) protein (206aa)
Nicotinamide mononucleotide transporter PnuC n=2 Tax=Bacteroides stercoris RepID=B0NKV0_BACSE
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EDS16941.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
nicotinamide mononucleotide transporter PnuC
L3_079_000G1_scaffold_247_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5825..6460
DNA (636bp) protein (212aa)
Thiamine pyrophosphokinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YK84_BACSE
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EPH22017.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
thiamine diphosphokinase
L3_079_000G1_scaffold_247_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6387..7367)
DNA (981bp) protein (327aa)
Putative membrane protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKV2_BACSE
Putative membrane protein {ECO:0000313|EMBL:EDS16943.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative permease
L3_079_000G1_scaffold_247_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7609..7944
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC60_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48570.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_079_000G1_scaffold_247_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7991..9292)
DNA (1302bp) protein (434aa)
Threonine synthase {ECO:0000313|EMBL:EDS16947.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EDS16947.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKV5_BACSE
L3_079_000G1_scaffold_247_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9378..10634)
DNA (1257bp) protein (419aa)
phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YK89_BACSE
Putative homoserine kinase {ECO:0000313|EMBL:EPH22022.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000G1_scaffold_247_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10670..13102)
DNA (2433bp) protein (811aa)
Homoserine dehydrogenase {ECO:0000313|EMBL:EDS16949.1}; EC=1.1.1.3 {ECO:0000313|EMBL:EDS16949.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
aspartate kinase (EC:1.1.1.3 2.7.2.4)
Homoserine dehydrogenase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKT9_BACSE
L3_079_000G1_scaffold_247_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13551..14588
DNA (1038bp) protein (346aa)
asparaginase (EC:3.5.1.1)
L-asparaginase type I n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC56_9BACE
L-asparaginase type I {ECO:0000313|EMBL:CDA48565.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_079_000G1_scaffold_247_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14601..15146)
DNA (546bp) protein (182aa)
Carbonate dehydratase n=3 Tax=Bacteroides RepID=B0NKU1_BACSE
Carbonate dehydratase {ECO:0000313|EMBL:CDA48564.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
carbonate dehydratase
L3_079_000G1_scaffold_247_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15264..16631
DNA (1368bp) protein (456aa)
DNA repair protein radA n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKU2_BACSE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
DNA replication and repair protein RadA
L3_079_000G1_scaffold_247_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16706..18292
DNA (1587bp) protein (529aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NKU3_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA48562.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_079_000G1_scaffold_247_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18390..19010
DNA (621bp) protein (207aa)
Transcriptional regulator LuxR family n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6APQ1_9BACE
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CDA48561.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
LuxR family transcriptional regulator
L3_079_000G1_scaffold_247_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19124..21601
DNA (2478bp) protein (826aa)
TonB-dependent receptor n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKX0_BACSE
TonB-dependent receptor {ECO:0000313|EMBL:EDS16955.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
TonB-dependent receptor
L3_079_000G1_scaffold_247_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21866..22918)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZMX2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16956.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_079_000G1_scaffold_247_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23038..24975)
DNA (1938bp) protein (646aa)
Protease n=1 Tax=Bacteroides stercoris CC31F RepID=S3YI77_BACSE
Protease {ECO:0000313|EMBL:EPH22031.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
peptidase U32
L3_079_000G1_scaffold_247_20
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24959..25876)
DNA (918bp) protein (306aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Homoserine O-succinyltransferase n=2 Tax=Bacteroides RepID=B0NKX3_BACSE
homoserine O-succinyltransferase
L3_079_000G1_scaffold_247_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26176..27042
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YWT5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH22033.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_079_000G1_scaffold_247_22
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27341..29254
DNA (1914bp) protein (638aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC48_9BACE
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CDA48555.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
lipoprotein
L3_079_000G1_scaffold_247_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29355..30308
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKZ0_BACSE
L3_079_000G1_scaffold_247_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30324..31448
DNA (1125bp) protein (375aa)
DNA polymerase III, gamma/tau subunits (EC:2.7.7.7)
DNA polymerase III, delta' subunit n=1 Tax=Bacteroides stercoris CC31F RepID=S3YI82_BACSE
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EPH22036.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000G1_scaffold_247_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31507..32853
DNA (1347bp) protein (449aa)
PSP1 C-terminal domain protein n=2 Tax=Bacteroides stercoris RepID=B0NKZ2_BACSE
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EDS16965.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
PSP1 domain protein
L3_079_000G1_scaffold_247_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32831..33316
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YWU0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH22038.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
gliding motility-associated lipoprotein GldH
L3_079_000G1_scaffold_247_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33319..34776)
DNA (1458bp) protein (486aa)
Rod shape determining protein RodA n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGC5_BACSE
Rod shape determining protein RodA {ECO:0000313|EMBL:EPH22039.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
cell cycle protein
L3_079_000G1_scaffold_247_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34803..36668)
DNA (1866bp) protein (622aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein 2 n=2 Tax=Bacteroides RepID=R6AID5_9BACE
Penicillin-binding protein 2 {ECO:0000313|EMBL:EPH22040.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_079_000G1_scaffold_247_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36722..37222)
DNA (501bp) protein (167aa)
Rod shape-determining protein MreD n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKX6_BACSE
Rod shape-determining protein MreD {ECO:0000313|EMBL:EDS16969.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
rod shape-determining protein MreD
L3_079_000G1_scaffold_247_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37219..38061)
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NKX7_BACSE
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
rod shape-determining protein MreC
Displaying items 1-30 of 57 in total

View Taxonomy