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L3_079_000G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_260_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(253..1626)
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1339284 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T10.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Bacteroides RepID=A7LYH8_BACOV
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_079_000G1_scaffold_260_2
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1873..2334
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J8E2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI12169.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_079_000G1_scaffold_260_3
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2512..4011
DNA (1500bp) protein (500aa)
Succinate CoA transferase n=6 Tax=Bacteroides RepID=C3Q9S0_9BACE
Acetyl-CoA hydrolase/transferase family protein {ECO:0000313|EMBL:EFI12168.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
succinate CoA transferases
L3_079_000G1_scaffold_260_4
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4325..5731)
DNA (1407bp) protein (469aa)
D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family (EC:3.4.16.4 3.4.99.-)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Bacteroides RepID=D4WGP3_BACOV
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:CDB57773.1}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
L3_079_000G1_scaffold_260_5
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5888..7231)
DNA (1344bp) protein (448aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QRA1_9BACE
L3_079_000G1_scaffold_260_6
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7273..7725)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7J8D8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI12165.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Protein of unknown function (DUF1200).
L3_079_000G1_scaffold_260_7
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7832..9403
DNA (1572bp) protein (524aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=7 Tax=Bacteroides RepID=A7LYH1_BACOV
L3_079_000G1_scaffold_260_8
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9400..9681
DNA (282bp) protein (94aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=C3Q9S5_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGN04872.1}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_079_000G1_scaffold_260_9
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9839..10417)
DNA (579bp) protein (193aa)
Rubrerythrin n=10 Tax=Bacteroides RepID=D6CYY1_9BACE
Rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:EEZ05682.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_079_000G1_scaffold_260_10
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10521..10664
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9SQV5_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY58308.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_079_000G1_scaffold_260_11
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10667..12346
DNA (1680bp) protein (560aa)
Sulfate permease n=2 Tax=Bacteroides ovatus RepID=A7LYF9_BACOV
Sulfate permease {ECO:0000313|EMBL:EDO11666.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
high affinity sulphate transporter 1
L3_079_000G1_scaffold_260_12
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12551..14875)
DNA (2325bp) protein (775aa)
N-acetyl-beta-hexosaminidase {ECO:0000313|EMBL:CBK67381.1}; EC=3.2.1.52 {ECO:0000313|EMBL:CBK67381.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
N-acetyl-beta-hexosaminidase (EC:3.2.1.52)
N-acetyl-beta-hexosaminidase n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CYX9_9BACE
L3_079_000G1_scaffold_260_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14974..16797)
DNA (1824bp) protein (608aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9UU89_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86203.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_079_000G1_scaffold_260_14
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16841..18655)
DNA (1815bp) protein (605aa)
SusD family n=8 Tax=Bacteroides RepID=D6CYX7_9BACE
SusD family protein {ECO:0000313|EMBL:EEZ05687.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
SusD family.
L3_079_000G1_scaffold_260_15
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18669..22025)
DNA (3357bp) protein (1119aa)
Outer membrane receptor for ferrienterochelin and colicins n=7 Tax=Bacteroides RepID=D6CYX6_9BACE
Outer membrane receptor for ferrienterochelin and colicins
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEO48728.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_079_000G1_scaffold_260_16
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22055..23707)
DNA (1653bp) protein (551aa)
Glycosyl hydrolase, family 18 n=6 Tax=Bacteroides RepID=C3Q9U5_9BACE
Glycosyl hydrolase, family 18 {ECO:0000313|EMBL:EEO48729.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Chitinase
L3_079_000G1_scaffold_260_17
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24765..26522)
DNA (1758bp) protein (586aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D6CYX4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI12153.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_079_000G1_scaffold_260_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26659..26844)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6CYX3_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI12152.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_079_000G1_scaffold_260_19
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27050..29497
DNA (2448bp) protein (816aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3Q9U9_9BACE
Putative large secreted protein {ECO:0000313|EMBL:CDM02529.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L3_079_000G1_scaffold_260_20
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29534..33478
DNA (3945bp) protein (1315aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UTU3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86196.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Signal transduction histidine kinase
L3_079_000G1_scaffold_260_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33636..35000)
DNA (1365bp) protein (455aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Bacteroides ovatus SD CMC 3f RepID=D4WBH5_BACOV
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:KDS20036.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
multidrug resistance protein
L3_079_000G1_scaffold_260_22
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35013..36602)
DNA (1590bp) protein (530aa)
RND transporter, HAE1 family n=2 Tax=Bacteroides RepID=A7LYF7_BACOV
RND transporter, HAE1 family {ECO:0000313|EMBL:EDO11664.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
L3_079_000G1_scaffold_260_23
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36619..38124)
DNA (1506bp) protein (502aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9SQ36_BACOV
RND transporter, HAE1 family {ECO:0000313|EMBL:EDO11664.1}; TaxID=411476 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / NCTC; 11153).;"
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
L3_079_000G1_scaffold_260_24
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38139..39245)
DNA (1107bp) protein (369aa)
Multidrug resistance protein n=1 Tax=Bacteroides sp. D22 RepID=D7J8C1_9BACE
Multidrug resistance protein {ECO:0000313|EMBL:EFI12148.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
RND family efflux transporter, MFP subunit
L3_079_000G1_scaffold_260_25
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39469..39876
DNA (408bp) protein (136aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroides RepID=D4VHP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07602.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
transcriptional regulator
L3_079_000G1_scaffold_260_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39848..40381
DNA (534bp) protein (178aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=A7LYF5_BACOV
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS20039.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
transcriptional regulator
L3_079_000G1_scaffold_260_27
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40469..41479)
DNA (1011bp) protein (337aa)
HipA-like C-terminal domain protein n=6 Tax=Bacteroides RepID=C3Q9V5_9BACE
HipA-like C-terminal domain protein {ECO:0000313|EMBL:EEO48739.2}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
HipA-like C-terminal domain./HipA-like N-terminal domain.
L3_079_000G1_scaffold_260_28
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41482..41805)
DNA (324bp) protein (108aa)
HipA domain protein n=6 Tax=Bacteroides RepID=C3Q9V6_9BACE
HipA domain protein {ECO:0000313|EMBL:EEZ05700.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
HipA N-terminal domain
L3_079_000G1_scaffold_260_29
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41817..42011)
DNA (195bp) protein (65aa)
Predicted transcriptional regulator with C-terminal CBS domains n=9 Tax=Bacteroides RepID=D6CYW4_9BACE
Predicted transcriptional regulator with C-terminal CBS domains
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEZ05701.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
L3_079_000G1_scaffold_260_30
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42070..42324
DNA (255bp) protein (85aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C3Q9V8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN07598.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
Displaying items 1-30 of 173 in total

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