ggKbase home page

L3_079_000G1_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_316_1
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175..1608)
DNA (1434bp) protein (478aa)
Aspartate ammonia-lyase {ECO:0000313|EMBL:EFL83951.1}; EC=4.3.1.1 {ECO:0000313|EMBL:EFL83951.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Aspartate ammonia-lyase n=2 Tax=Burkholderiales RepID=D9Y4Q5_9BURK
aspartate ammonia-lyase
L3_079_000G1_scaffold_316_2
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1801..2766
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=3 Tax=Burkholderiales RepID=D9Y4Q6_9BURK
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCX86034.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
LysR-family regulatory protein
L3_079_000G1_scaffold_316_3
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2804..3970)
DNA (1167bp) protein (389aa)
Alcohol dehydrogenase, iron-dependent n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QIT1_9BURK
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EGG56477.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
iron-containing alcohol dehydrogenase
L3_079_000G1_scaffold_316_4
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4039..5547)
DNA (1509bp) protein (503aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QIT0_9BURK
L3_079_000G1_scaffold_316_5
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5748..6638)
DNA (891bp) protein (297aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formimidoyltransferase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E0K8_9BURK
Glutamate formimidoyltransferase {ECO:0000313|EMBL:CCX86030.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_079_000G1_scaffold_316_6
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7872)
DNA (1215bp) protein (405aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E495_9BURK
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:CCX86029.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_079_000G1_scaffold_316_7
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7937..8914)
DNA (978bp) protein (326aa)
Putative membrane protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2B1_9BURK
Putative membrane protein {ECO:0000313|EMBL:EFL84161.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
hypothetical protein
L3_079_000G1_scaffold_316_8
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9092..10060
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=2 Tax=Burkholderiales RepID=D9Y2B2_9BURK
Putative transcriptional regulator LysR family {ECO:0000313|EMBL:CCX86027.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
LysR family transcriptional regulator
L3_079_000G1_scaffold_316_9
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10188..11504)
DNA (1317bp) protein (439aa)
Anaerobic C4-dicarboxylate transporter n=2 Tax=Burkholderiales RepID=D9Y2B3_9BURK
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
anaerobic c4-dicarboxylate antiporter, Dcu family
L3_079_000G1_scaffold_316_10
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11883..13283)
DNA (1401bp) protein (467aa)
Flavocytochrome c n=2 Tax=Burkholderiales RepID=D9Y2B4_9BURK
Fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CCX86025.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
fumarate reductase flavoprotein subunit precursor
L3_079_000G1_scaffold_316_11
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13283..13930)
DNA (648bp) protein (216aa)
Putative transcriptional regulatory protein FixJ n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QIS2_9BURK
Putative transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EGG56468.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
LuxR family two component transcriptional regulator
L3_079_000G1_scaffold_316_12
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13940..15736)
DNA (1797bp) protein (599aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Burkholderiales RepID=D9Y2B6_9BURK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFL84166.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
sensor histidine kinase
L3_079_000G1_scaffold_316_13
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15807..17609)
DNA (1803bp) protein (601aa)
Flavocytochrome c n=2 Tax=Burkholderiales RepID=D9Y2B7_9BURK
Flavocytochrome c {ECO:0000313|EMBL:EFL84167.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
FAD-binding protein
L3_079_000G1_scaffold_316_14
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17642..18568)
DNA (927bp) protein (309aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
3-dehydroquinate dehydratase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5ED97_9BURK
3-dehydroquinate dehydratase, type I
L3_079_000G1_scaffold_316_15
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18742..19494)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E0K0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX86020.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
PKD domain containing protein
L3_079_000G1_scaffold_316_16
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19549..20922)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2C0_9BURK
MATE efflux family protein {ECO:0000313|EMBL:EFL84170.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
MATE efflux family protein
L3_079_000G1_scaffold_316_17
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21058..23421)
DNA (2364bp) protein (788aa)
Dimethyl sulfoxide/trimethylamine N-oxide reductase {ECO:0000313|EMBL:EFL84171.1}; EC=1.7.2.3 {ECO:0000313|EMBL:EFL84171.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
torA; trimethylamine-N-oxide reductase (EC:1.7.2.3)
Dimethyl sulfoxide/trimethylamine N-oxide reductase n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2C1_9BURK
L3_079_000G1_scaffold_316_18
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23618..24037
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y2C2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFL84172.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
nitrous oxide-stimulated promoter family protein
L3_079_000G1_scaffold_316_19
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24086..25597)
DNA (1512bp) protein (504aa)
flavocytochrome c (EC:1.3.99.1)
Flavocytochrome c n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EB93_9BURK
Flavocytochrome c {ECO:0000313|EMBL:CCX86002.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_079_000G1_scaffold_316_20
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25747..26295
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Burkholderiales RepID=D9Y2C4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX86000.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L3_079_000G1_scaffold_316_21
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26285..26752
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E0N0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX85998.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
hypothetical protein
L3_079_000G1_scaffold_316_22
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27236..28573
DNA (1338bp) protein (446aa)
Argininosuccinate synthase {ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|SAAS:SAAS00009947};; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
Argininosuccinate synthase n=2 Tax=Burkholderiales RepID=D9Y2C6_9BURK
Argininosuccinate synthase
L3_079_000G1_scaffold_316_23
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28679..29566)
DNA (888bp) protein (296aa)
Polysulfide reductase, NrfD n=2 Tax=Burkholderiales RepID=D9Y2C7_9BURK
Polysulfide reductase, NrfD {ECO:0000313|EMBL:EFL84177.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
molybdopterin oxidoreductase, membrane subunit
L3_079_000G1_scaffold_316_24
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29563..30141)
DNA (579bp) protein (193aa)
Molybdopterin oxidoreductase iron-sulfur binding subunit n=3 Tax=Burkholderiales RepID=R5E433_9BURK
Molybdopterin oxidoreductase iron-sulfur binding subunit {ECO:0000313|EMBL:CCX85994.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
4Fe-4S ferredoxin, iron-sulfur binding domain protein
L3_079_000G1_scaffold_316_25
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30145..32721)
DNA (2577bp) protein (859aa)
Tat pathway signal sequence domain protein n=1 Tax=Parasutterella excrementihominis YIT 11859 RepID=F3QIQ7_9BURK
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EGG56453.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
molybdopterin oxidoreductase, molybdopterin binding subunit
L3_079_000G1_scaffold_316_26
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33513..35084
DNA (1572bp) protein (524aa)
Putative histidine Kinase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E0J5_9BURK
Putative histidine Kinase {ECO:0000313|EMBL:CCX85988.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
sensor histidine kinase
L3_079_000G1_scaffold_316_27
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35081..35695
DNA (615bp) protein (205aa)
DNA-binding response regulator LuxR family n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5ED26_9BURK
DNA-binding response regulator LuxR family {ECO:0000313|EMBL:CCX85986.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
two component LuxR family transcriptional regulator
L3_079_000G1_scaffold_316_28
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35688..37115
DNA (1428bp) protein (476aa)
Flavocytochrome c n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E423_9BURK
Flavocytochrome c {ECO:0000313|EMBL:CCX85984.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
flavocytochrome C
L3_079_000G1_scaffold_316_29
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37606..37878)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EB51_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CCX85982.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_079_000G1_scaffold_316_30
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38130..39167)
DNA (1038bp) protein (346aa)
ltaE; Low specificity L-threonine aldolase LtaE (EC:4.1.2.5)
L-threonine aldolase low-specificity n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E0C3_9BURK
L-threonine aldolase low-specificity {ECO:0000313|EMBL:CCX85980.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
Displaying items 1-30 of 68 in total

View Taxonomy