ggKbase home page

L3_079_000G1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_318_1
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

356..1513
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=7 Tax=Bacteroidales RepID=C7XBC3_9PORP
two-component sensor histidine kinase
L3_079_000G1_scaffold_318_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1602..2192
DNA (591bp) protein (197aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=K5Z9T3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50087.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_079_000G1_scaffold_318_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2205..2390
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=14 Tax=Bacteroidales RepID=A7AJQ3_9PORP
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
50S ribosomal protein L32
L3_079_000G1_scaffold_318_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2493..3497
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=4 Tax=Bacteroidales RepID=FABH_PARD8
3-oxoacyl-ACP synthase
L3_079_000G1_scaffold_318_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3478..4371
DNA (894bp) protein (298aa)
GTPase Era n=9 Tax=Bacteroidales RepID=A6LEP6_PARD8
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
era; GTP-binding protein Era
L3_079_000G1_scaffold_318_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4396..5709
DNA (1314bp) protein (438aa)
GTPase Der n=2 Tax=Bacteroidales RepID=D0TI13_9BACE
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
engA; GTP-binding protein EngA
L3_079_000G1_scaffold_318_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5762..6037)
DNA (276bp) protein (92aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Parabacteroides RepID=E1Z0Q6_9PORP
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EKN23587.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_000G1_scaffold_318_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6037..6243)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0Q5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23588.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_079_000G1_scaffold_318_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6358..7209)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6ALQ8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN24676.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hemagglutinin-like protein
L3_079_000G1_scaffold_318_10
unknown

Not on your lists

comp(7364..7498)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_000G1_scaffold_318_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7834..9177
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A6U5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN11393.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_079_000G1_scaffold_318_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9522..10115
DNA (594bp) protein (198aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7XBD4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23598.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_000G1_scaffold_318_13
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10175..12526)
DNA (2352bp) protein (784aa)
Glycosyl hydrolase, family 3 n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IR52_9BACE
Glycosyl hydrolase, family 3 {ECO:0000313|EMBL:EFI08429.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
beta-glucosidase
L3_079_000G1_scaffold_318_14
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12703..14478)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IUG5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50069.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_079_000G1_scaffold_318_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14536..15612)
DNA (1077bp) protein (359aa)
Radical SAM-family protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IIE1_9PORP
Radical SAM-family protein {ECO:0000313|EMBL:CDB50068.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
heme biosynthesis protein
L3_079_000G1_scaffold_318_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15616..16086)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JJ55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB50067.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_079_000G1_scaffold_318_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16090..16932)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IXF8_9PORP
Cna B-type domain protein {ECO:0000313|EMBL:KDS54734.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_079_000G1_scaffold_318_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17062..18909
DNA (1848bp) protein (616aa)
ABC transporter, ATP-binding protein, MsbA family n=9 Tax=Bacteroidales RepID=A6LEN5_PARD8
ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:KDS68074.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_079_000G1_scaffold_318_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18992..21421
DNA (2430bp) protein (810aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0N8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23605.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycoside hydrolase
L3_079_000G1_scaffold_318_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21482..22696)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0N7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23606.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_000G1_scaffold_318_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22737..23411)
DNA (675bp) protein (225aa)
Phosphate-specific transport system accessory protein PhoU n=9 Tax=Bacteroidales RepID=A6LEN2_PARD8
transcriptional regulator
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_000G1_scaffold_318_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23443..24195)
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Phosphate ABC transporter, ATP-binding protein n=3 Tax=Bacteroidales RepID=D0THZ4_9BACE
phosphate ABC transporter ATP-binding protein
L3_079_000G1_scaffold_318_23
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24211..25098)
DNA (888bp) protein (296aa)
Phosphate ABC transporter, permease protein PstA n=5 Tax=Bacteroidales RepID=D0THZ3_9BACE
ABC transporter permease
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:KEJ84069.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_079_000G1_scaffold_318_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25107..26294)
DNA (1188bp) protein (396aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Parabacteroides RepID=E1Z0N3_9PORP
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EKN23610.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ABC transporter permease
L3_079_000G1_scaffold_318_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26454..26558)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AIU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23611.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_079_000G1_scaffold_318_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26567..26851)
DNA (285bp) protein (95aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0THZ1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS68075.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_079_000G1_scaffold_318_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26901..28397)
DNA (1497bp) protein (499aa)
Succinate CoA transferase n=3 Tax=Parabacteroides RepID=C7XBE7_9PORP
Succinate CoA transferase {ECO:0000313|EMBL:EKN23613.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acetyl-CoA hydrolase/transferase
L3_079_000G1_scaffold_318_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28499..28954)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IR64_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08441.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_079_000G1_scaffold_318_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29215..30588
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=6 Tax=Bacteroidales RepID=MIAB_PARD8
(dimethylallyl)adenosine tRNA methylthiotransferase
L3_079_000G1_scaffold_318_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30736..31068
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XBF0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50150.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
Displaying items 1-30 of 93 in total

View Taxonomy