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L3_079_000G1_scaffold_323

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_323_1
unknown

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1..171
DNA (171bp) protein (57aa)

This feature has no annotations

L3_079_000G1_scaffold_323_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(298..3480)
DNA (3183bp) protein (1061aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEQ1_9FIRM
L3_079_000G1_scaffold_323_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3877..4182)
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76671.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
TrpR-related protein YerC/YecD
L3_079_000G1_scaffold_323_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4420..5181)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76670.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Histidinol phosphatase and related hydrolases of the PHP family
L3_079_000G1_scaffold_323_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5623..6795)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76669.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
inner-membrane translocator
L3_079_000G1_scaffold_323_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6801..8339)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76668.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC transporter
L3_079_000G1_scaffold_323_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8483..9550)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79902.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_079_000G1_scaffold_323_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9768..10865)
DNA (1098bp) protein (366aa)
D-xylose ABC transporter, D-xylose-binding protein n=2 Tax=Ruminococcus RepID=C6JEP5_9FIRM
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD79903.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
LacI family transcriptional regulator
L3_079_000G1_scaffold_323_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10865..12460)
DNA (1596bp) protein (532aa)
Two component transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNT5_9FIRM
Two component transcriptional regulator {ECO:0000313|EMBL:CDD79904.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L3_079_000G1_scaffold_323_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12487..13968)
DNA (1482bp) protein (494aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP3_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_079_000G1_scaffold_323_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13965..14984)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76663.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type sugar transport system, periplasmic component
L3_079_000G1_scaffold_323_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15176..15928
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CNU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79909.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
polysaccharide deacetylase
L3_079_000G1_scaffold_323_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16053..16760
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79911.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted integral membrane protein
L3_079_000G1_scaffold_323_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16757..17683
DNA (927bp) protein (309aa)
TIGR01212 family radical SAM protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN8_9FIRM
TIGR01212 family radical SAM protein {ECO:0000313|EMBL:EES76659.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
radical SAM protein, TIGR01212 family
L3_079_000G1_scaffold_323_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17720..18232
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79913.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_079_000G1_scaffold_323_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18434..19753
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76657.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_079_000G1_scaffold_323_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19795..20418)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79917.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Cytidylate kinase
L3_079_000G1_scaffold_323_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20433..21143)
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CNU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98768.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-)
L3_079_000G1_scaffold_323_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21156..21914)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPP2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD79920.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-)
L3_079_000G1_scaffold_323_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21918..22973)
DNA (1056bp) protein (352aa)
Inner-membrane translocator ABC transporter n=2 Tax=Ruminococcus RepID=R7CPQ2_9FIRM
Inner-membrane translocator ABC transporter {ECO:0000313|EMBL:CDD79921.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
inner-membrane translocator
L3_079_000G1_scaffold_323_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22984..23871)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76654.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-)
L3_079_000G1_scaffold_323_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24120..25274)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76653.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)
L3_079_000G1_scaffold_323_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(25710..26066)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN1_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L20P
L3_079_000G1_scaffold_323_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26114..26311)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEN0_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L35P
L3_079_000G1_scaffold_323_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26347..26841)
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=2 Tax=Ruminococcus RepID=C6JEM9_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial translation initiation factor 3 (bIF-3)
L3_079_000G1_scaffold_323_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27295..27624
DNA (330bp) protein (110aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75987.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Domain of Unknown Function (DUF1540).
L3_079_000G1_scaffold_323_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27771..28961)
DNA (1191bp) protein (397aa)
Cell division protein FtsZ n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM7_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell division protein FtsZ
L3_079_000G1_scaffold_323_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29167..30285)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76647.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cell division septal protein
L3_079_000G1_scaffold_323_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30326..31609)
DNA (1284bp) protein (428aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=2 Tax=Ruminococcus RepID=C6JEM5_9FIRM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L3_079_000G1_scaffold_323_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31690..32787)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD75991.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial cell division membrane protein
Displaying items 1-30 of 66 in total

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