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L3_079_000G1_scaffold_334

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_334_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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396..2369
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Z5_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
excinuclease ABC subunit B
L3_079_000G1_scaffold_334_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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2423..5257
DNA (2835bp) protein (945aa)
UvrABC system protein A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET23_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
uvrA; ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
L3_079_000G1_scaffold_334_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

5306..6739
DNA (1434bp) protein (478aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Y7_9FIRM
putative nicotinate phosphoribosyltransferase
L3_079_000G1_scaffold_334_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6834..7391
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03018.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_079_000G1_scaffold_334_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(7497..8426)
DNA (930bp) protein (310aa)
fba1; fructose-1,6-bisphosphate aldolase Fba1 (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLV3_9FIRM
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDB03017.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(8566..8997)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03016.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

9110..9376
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03015.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(9439..9963)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03014.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

10045..11031
DNA (987bp) protein (329aa)
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER22_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDB03013.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

11054..11578
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLV0_9FIRM
sip3; signal peptidase I
L3_079_000G1_scaffold_334_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

11736..12092
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03011.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

12168..12632
DNA (465bp) protein (155aa)
SsrA-binding protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET16_9FIRM
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
smpB; SsrA-binding protein
L3_079_000G1_scaffold_334_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

12632..13345
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03009.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
B3/4 domain-containing protein
L3_079_000G1_scaffold_334_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

14953..16383
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03008.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

16395..17117
DNA (723bp) protein (241aa)
Multidrug ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLU7_9FIRM
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB03007.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ABC transporter
L3_079_000G1_scaffold_334_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

17159..18949
DNA (1791bp) protein (597aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Y1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03006.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L3_079_000G1_scaffold_334_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(19068..19484)
DNA (417bp) protein (139aa)
Acyl-CoA thioester hydrolase YbgC/YbaW family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ET12_9FIRM
Acyl-CoA thioester hydrolase YbgC/YbaW family {ECO:0000313|EMBL:CDB03005.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
thioesterase superfamily protein
L3_079_000G1_scaffold_334_18
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19951..21516)
DNA (1566bp) protein (522aa)
L-lactate permease n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A3D0_NATTJ
L-lactate permease
L-lactate permease {ECO:0000313|EMBL:ACB86359.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
L3_079_000G1_scaffold_334_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21584..22714)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62994.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
deacylase
L3_079_000G1_scaffold_334_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22742..24160)
DNA (1419bp) protein (473aa)
Na+/H+ antiporter NhaC n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LW10_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EOS62995.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
nhaC; sodium/proton antiporter NhaC
L3_079_000G1_scaffold_334_21
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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24447..26510
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PXY7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO77702.2}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
putative sigma-54 specific transcriptional regulator
L3_079_000G1_scaffold_334_22
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

26960..27625
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0X2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03004.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_079_000G1_scaffold_334_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

27717..28631
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03003.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_079_000G1_scaffold_334_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

28624..29460
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FLU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03002.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L3_079_000G1_scaffold_334_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

29470..30381
DNA (912bp) protein (304aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1X5_9FIRM
histidine kinase
L3_079_000G1_scaffold_334_26
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30518..32710
DNA (2193bp) protein (731aa)
CRISPR-associated endonuclease Cas3-HD {ECO:0000313|EMBL:EEQ57501.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEQ57501.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
CRISPR-associated endonuclease Cas3-HD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH16_9FIRM
cas3; CRISPR-associated helicase Cas3
L3_079_000G1_scaffold_334_27
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32731..33480
DNA (750bp) protein (250aa)
CRISPR-associated protein Cas5, Dvulg subtype n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH15_9FIRM
CRISPR-associated protein Cas5, Dvulg subtype {ECO:0000313|EMBL:EEQ57500.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cas5; CRISPR-associated protein Cas5, Dvulg subtype
L3_079_000G1_scaffold_334_28
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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33474..35255
DNA (1782bp) protein (594aa)
Crispr-protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6CGU4_9FIRM
Crispr-protein {ECO:0000313|EMBL:CDA64492.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas_csd1; CRISPR-associated protein, Csd1 family
L3_079_000G1_scaffold_334_29
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

35271..36128
DNA (858bp) protein (286aa)
Crispr-protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BJQ6_9FIRM
Crispr-protein {ECO:0000313|EMBL:CDA64493.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas_csd2; CRISPR-associated protein, Csd2 family
L3_079_000G1_scaffold_334_30
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

36128..36790
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BU54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA64494.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
cas4; CRISPR-associated protein Cas4
Displaying items 1-30 of 64 in total

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