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L3_079_000G1_scaffold_337

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Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_337_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(193..450)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78591.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_079_000G1_scaffold_337_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(797..1192)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ENB1_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RpsI; 30S ribosomal protein S9
L3_079_000G1_scaffold_337_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(1218..1646)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F8A6_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
rplM; 50S ribosomal protein L13
L3_079_000G1_scaffold_337_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(1928..2707)
DNA (780bp) protein (260aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECN0_9FIRM
L3_079_000G1_scaffold_337_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(2830..3639)
DNA (810bp) protein (270aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EME5_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000313|EMBL:CDA98304.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter permease
L3_079_000G1_scaffold_337_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3737..4636)
DNA (900bp) protein (300aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEI2_9FIRM
ABC transporter ATP-binding protein
L3_079_000G1_scaffold_337_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(4645..5508)
DNA (864bp) protein (288aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC transporter related n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ENB6_9FIRM
ABC transporter
L3_079_000G1_scaffold_337_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

5735..6676
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F8B1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98307.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L3_079_000G1_scaffold_337_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(6814..7419)
DNA (606bp) protein (202aa)
50S ribosomal protein L17 n=2 Tax=root RepID=R6EMF1_9FIRM
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
rplQ; 50S ribosomal protein L17
L3_079_000G1_scaffold_337_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7573..8532)
DNA (960bp) protein (320aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DNA-directed RNA polymerase subunit alpha n=3 Tax=root RepID=R6EEI6_9FIRM
DNA-directed RNA polymerase subunit alpha
L3_079_000G1_scaffold_337_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(8637..9230)
DNA (594bp) protein (198aa)
30S ribosomal protein S4 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECP1_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
SSU ribosomal protein S4P
L3_079_000G1_scaffold_337_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(9368..9763)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEJ1_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
30S ribosomal protein S11
L3_079_000G1_scaffold_337_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(9840..10211)
DNA (372bp) protein (124aa)
30S ribosomal protein S13 n=2 Tax=Firmicutes RepID=R6F8C2_9FIRM
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
30S ribosomal protein S13
L3_079_000G1_scaffold_337_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10713..12023)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01175.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_079_000G1_scaffold_337_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(12048..12266)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=root RepID=R6F8C7_9FIRM
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
translation initiation factor IF-1
L3_079_000G1_scaffold_337_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12315..12587)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W390_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01179.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L3_079_000G1_scaffold_337_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12633..13385)
DNA (753bp) protein (251aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=root RepID=R6WAG9_9CLOT
L3_079_000G1_scaffold_337_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13443..14084)
DNA (642bp) protein (214aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VR93_9CLOT
L3_079_000G1_scaffold_337_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(14260..15573)
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY n=2 Tax=root RepID=R6F8D3_9FIRM
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
protein translocase subunit secY/sec61 alpha
L3_079_000G1_scaffold_337_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(15573..16013)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=2 Tax=root RepID=R6ECQ4_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
50S ribosomal protein L15
L3_079_000G1_scaffold_337_21

Not on your lists


comp(16035..16220)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=2 Tax=root RepID=R6EMG9_9FIRM
Ribosomal protein L30, bacterial-type {ECO:0000313|EMBL:EKC66885.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
LSU ribosomal protein L30P
L3_079_000G1_scaffold_337_22
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(16269..16778)
DNA (510bp) protein (170aa)
30S ribosomal protein S5 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EEK7_9FIRM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RpsE; 30S ribosomal protein S5
L3_079_000G1_scaffold_337_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(16800..17168)
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ENE1_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
50S ribosomal protein L18
L3_079_000G1_scaffold_337_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(17189..17731)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F8D8_9FIRM
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
LSU ribosomal protein L6P
L3_079_000G1_scaffold_337_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(17862..18263)
DNA (402bp) protein (134aa)
30S ribosomal protein S8 n=2 Tax=root RepID=R6ECQ9_9FIRM
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Ribosomal protein S8
L3_079_000G1_scaffold_337_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(18537..18722)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EMH5_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Ribosomal protein S14
L3_079_000G1_scaffold_337_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18741..19280)
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Clostridium sp. CAG:91 RepID=R6W4P6_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
rplE; 50S ribosomal protein L5
L3_079_000G1_scaffold_337_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(19304..19615)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 n=3 Tax=root RepID=R6F8E3_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
rplX; 50S ribosomal protein L24
L3_079_000G1_scaffold_337_29
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


comp(19628..19996)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=root RepID=R6EMH9_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
50S ribosomal protein L14
L3_079_000G1_scaffold_337_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(20055..20309)
DNA (255bp) protein (85aa)
30S ribosomal protein S17 n=1 Tax=Clostridium sp. CAG:91 RepID=R6WBZ9_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
30S ribosomal protein S17
Displaying items 1-30 of 78 in total

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