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L3_079_000G1_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_338_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..848
DNA (846bp) protein (282aa)
4Fe-4S binding domain protein n=2 Tax=Oscillibacter RepID=U2QSD8_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERK59129.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative iron hydrogenase
L3_079_000G1_scaffold_338_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(924..1844)
DNA (921bp) protein (307aa)
Transporter, auxin efflux carrier family protein n=2 Tax=Oscillibacter RepID=U2RUK3_9FIRM
Transporter, auxin efflux carrier family protein {ECO:0000313|EMBL:ERK59128.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative permease
L3_079_000G1_scaffold_338_3
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2006..2257)
DNA (252bp) protein (84aa)
30S ribosomal protein S18 n=2 Tax=Oscillibacter RepID=U2QD39_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsR; 30S ribosomal protein S18
L3_079_000G1_scaffold_338_4
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2283..2735)
DNA (453bp) protein (151aa)
Single-stranded DNA-binding protein n=2 Tax=Oscillibacter RepID=U2PV08_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ssb; single-stranded DNA-binding protein
L3_079_000G1_scaffold_338_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2748..3044)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=2 Tax=Oscillibacter RepID=U2QDR7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsF; 30S ribosomal protein S6
L3_079_000G1_scaffold_338_6
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3292..3963
DNA (672bp) protein (224aa)
CAAX amino terminal protease family protein n=2 Tax=Oscillibacter RepID=U2RL33_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ERK59172.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
CAAX amino terminal protease family protein
L3_079_000G1_scaffold_338_7
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4139..4888
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QRL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59171.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
protein of unknown function DUF81
L3_079_000G1_scaffold_338_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4939..5562)
DNA (624bp) protein (208aa)
Radical SAM domain protein n=2 Tax=Oscillibacter RepID=U2PUT5_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:ERK59169.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000G1_scaffold_338_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5583..6539)
DNA (957bp) protein (319aa)
Uncharacterized protein (Fragment) n=2 Tax=Oscillibacter RepID=U2QDK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59168.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000G1_scaffold_338_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6536..7312)
DNA (777bp) protein (259aa)
Hydrolase, TatD family n=2 Tax=Oscillibacter RepID=U2Q8X6_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:ERK59255.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative deoxyribonuclease
L3_079_000G1_scaffold_338_11
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7458..7721)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=2 Tax=Oscillibacter RepID=U2QSQ1_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsT; 30S ribosomal protein S20
L3_079_000G1_scaffold_338_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7915..8811
DNA (897bp) protein (299aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
gpr; putative germination protease (EC:3.4.24.78)
Germination protease n=2 Tax=Oscillibacter RepID=U2QD61_9FIRM
L3_079_000G1_scaffold_338_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8978..9733)
DNA (756bp) protein (252aa)
exoA; exodeoxyribonuclease (EC:3.1.11.2)
Exodeoxyribonuclease III n=2 Tax=Oscillibacter RepID=U2QDU0_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:ERK59252.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_338_14
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9944..11995
DNA (2052bp) protein (684aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
metG2; methionine--tRNA ligase MetG (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Oscillibacter RepID=U2QRT4_9FIRM
L3_079_000G1_scaffold_338_15
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12335..12835)
DNA (501bp) protein (167aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
2'-5' RNA ligase n=2 Tax=Oscillibacter RepID=U2QSP6_9FIRM
2'-5' RNA ligase
L3_079_000G1_scaffold_338_16
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12929..13588
DNA (660bp) protein (220aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Oscillibacter RepID=U2RLG9_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERK59248.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hydrolase
L3_079_000G1_scaffold_338_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13649..14443)
DNA (795bp) protein (265aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thiM; hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=2 Tax=Oscillibacter RepID=U2RUS3_9FIRM
L3_079_000G1_scaffold_338_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14468..14983)
DNA (516bp) protein (172aa)
Protein ThiW n=2 Tax=Oscillibacter RepID=U2QDA4_9FIRM
Protein ThiW {ECO:0000313|EMBL:ERK59246.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_079_000G1_scaffold_338_19
unknown

Not on your lists

comp(15005..15301)
DNA (297bp) protein (99aa)

This feature has no annotations

L3_079_000G1_scaffold_338_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15671..16312
DNA (642bp) protein (214aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
thiE; thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=2 Tax=Oscillibacter RepID=U2QSP1_9FIRM
L3_079_000G1_scaffold_338_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16309..16947
DNA (639bp) protein (213aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Oscillibacter RepID=U2RUR6_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:ERK59243.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_079_000G1_scaffold_338_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17060..17869
DNA (810bp) protein (270aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=2 Tax=Oscillibacter RepID=U2QD99_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ERK59242.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_338_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18149..19900
DNA (1752bp) protein (584aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Oscillibacter RepID=U2Q8W2_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ERK59240.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative drug efflux protein
L3_079_000G1_scaffold_338_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19900..20637
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=2 Tax=Oscillibacter RepID=U2QSN7_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK59239.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative drug efflux ABC transporter ATP-binding protein
L3_079_000G1_scaffold_338_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20634..21833
DNA (1200bp) protein (400aa)
Efflux ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2RUR0_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:ERK59238.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative drug efflux ABC transporter permease protein
L3_079_000G1_scaffold_338_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22077..22757
DNA (681bp) protein (227aa)
Putative chloramphenicol O-acetyltransferase n=3 Tax=Oscillibacter RepID=U2PVE5_9FIRM
Chloramphenicol O-acetyltransferase family protein {ECO:0000313|EMBL:ERK59236.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
acetyltransferase
L3_079_000G1_scaffold_338_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22812..23204)
DNA (393bp) protein (131aa)
Acetyltransferase, GNAT family n=2 Tax=Oscillibacter RepID=U2RLP2_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ERK59322.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative acyl-CoA N-acyltransferase
L3_079_000G1_scaffold_338_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23225..24058)
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
apurinic endonuclease APN1 (EC:3.1.21.2)
Probable endonuclease 4 n=2 Tax=Oscillibacter RepID=U2QS05_9FIRM
L3_079_000G1_scaffold_338_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24257..24418)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q940_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59320.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_079_000G1_scaffold_338_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24661..25332)
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2PVE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59319.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 73 in total

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