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L3_079_000G1_scaffold_394

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_394_1
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(316..1674)
DNA (1359bp) protein (453aa)
Citrate synthase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJE2_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Citrate synthase
L3_079_000G1_scaffold_394_2
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1882..3012)
DNA (1131bp) protein (377aa)
RNA polymerase sigma factor SigA n=2 Tax=root RepID=R5N3S4_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family
L3_079_000G1_scaffold_394_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3042..4802)
DNA (1761bp) protein (587aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
DNA primase, catalytic core (EC:2.7.7.-)
DNA primase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQ81_9FIRM
L3_079_000G1_scaffold_394_4
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4818..5831)
DNA (1014bp) protein (338aa)
deoxyguanosinetriphosphate triphosphohydrolase (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N2Q3_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_394_5

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comp(5893..6525)
DNA (633bp) protein (211aa)
Protein belonging to Uncharacterized protein family UPF0029 n=2 Tax=human gut metagenome RepID=K1T276_9ZZZZ
Protein belonging to Uncharacterized protein family UPF0029 {ECO:0000313|EMBL:EKC60190.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
conserved hypothetical protein TIGR00257
L3_079_000G1_scaffold_394_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6584..6787)
DNA (204bp) protein (68aa)
50S ribosomal protein L31 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJF3_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
LSU ribosomal protein L31P
L3_079_000G1_scaffold_394_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6887..10417)
DNA (3531bp) protein (1177aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Helicase-exonuclease AddAB AddA subunit n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3T7_9FIRM
recombination helicase AddA
L3_079_000G1_scaffold_394_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10410..13763)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91875.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_394_9
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13798..15081)
DNA (1284bp) protein (428aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQ97_9FIRM
alpha-galactosidase
L3_079_000G1_scaffold_394_10

Not on your lists

comp(15356..15790)
DNA (435bp) protein (145aa)
SUF system FeS assembly protein, NifU family n=1 Tax=human gut metagenome RepID=K1T8W2_9ZZZZ
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EKC62840.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
SUF system FeS assembly protein, NifU family
L3_079_000G1_scaffold_394_11
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15780..16994)
DNA (1215bp) protein (405aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MKA7_9FIRM
L3_079_000G1_scaffold_394_12
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16996..17904)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91884.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L3_079_000G1_scaffold_394_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17930..19336)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=2 Tax=root RepID=R5MJH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91885.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Iron-regulated ABC transporter membrane component SufB
L3_079_000G1_scaffold_394_14
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19367..20107)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N2S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91886.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Iron-regulated ABC transporter ATPase subunit SufC
L3_079_000G1_scaffold_394_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20104..20574)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91887.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
transcriptional regulator, BadM/Rrf2 family
L3_079_000G1_scaffold_394_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20848..22587)
DNA (1740bp) protein (580aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Putative isomerase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MKB1_9FIRM
putative isomerase
L3_079_000G1_scaffold_394_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22807..24279
DNA (1473bp) protein (491aa)
Major facilitator superfamily MFS_1 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQA8_9FIRM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCY91889.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_394_18
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24396..25622)
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJH5_9FIRM
L3_079_000G1_scaffold_394_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25946..27616)
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3W5_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
DNA repair protein RecN
L3_079_000G1_scaffold_394_20
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27621..28076)
DNA (456bp) protein (152aa)
Arginine repressor n=2 Tax=root RepID=R5MQC1_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
arginine repressor ArgR
L3_079_000G1_scaffold_394_21
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28078..28947)
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N2S9_9FIRM
ATP-NAD/AcoX kinase
L3_079_000G1_scaffold_394_22
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28953..29762)
DNA (810bp) protein (270aa)
Hemolysin A n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MKC3_9FIRM
Hemolysin A {ECO:0000313|EMBL:CCY91898.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hemolysin A
L3_079_000G1_scaffold_394_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29737..30594)
DNA (858bp) protein (286aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=root RepID=R5MQC5_9FIRM
L3_079_000G1_scaffold_394_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30764..31540)
DNA (777bp) protein (259aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=root RepID=R5MQC5_9FIRM
L3_079_000G1_scaffold_394_25
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31566..32444)
DNA (879bp) protein (293aa)
GGPPS1; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic (EC:2.5.1.-)
Polyprenyl synthetase n=2 Tax=root RepID=R5MJI8_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:CCY91900.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_079_000G1_scaffold_394_26

Not on your lists

comp(32450..32641)
DNA (192bp) protein (64aa)
Exonuclease VII, small subunit {ECO:0000313|EMBL:EKC60750.1}; EC=3.1.11.6 {ECO:0000313|EMBL:EKC60750.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=root RepID=R5N2T4_9FIRM
L3_079_000G1_scaffold_394_27
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32638..33846)
DNA (1209bp) protein (403aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3X7_9FIRM
L3_079_000G1_scaffold_394_28
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33846..34790)
DNA (945bp) protein (315aa)
Metallohydrolase glycoprotease/Kae1 family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MKC8_9FIRM
Metallohydrolase glycoprotease/Kae1 family {ECO:0000313|EMBL:CCY91903.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_079_000G1_scaffold_394_29
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34783..35187)
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MQC9_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
NusB antitermination factor
L3_079_000G1_scaffold_394_30
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35264..35632)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=root RepID=R5MJJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY91905.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
Displaying items 1-30 of 85 in total

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