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L3_079_000G1_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_425_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..2989
DNA (2988bp) protein (996aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WSS0_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD14403.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3011..4597
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5Y079_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06432.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
starch-binding protein
L3_079_000G1_scaffold_425_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4812..5981
DNA (1170bp) protein (390aa)
Site-specific recombinase, phage integrase family n=3 Tax=Parabacteroides RepID=A7AKW6_9PORP
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDD14401.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
integrase
L3_079_000G1_scaffold_425_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6228..7508
DNA (1281bp) protein (427aa)
ATPase, AAA family n=3 Tax=Parabacteroides RepID=A7AKW3_9PORP
ATPase, AAA family {ECO:0000313|EMBL:EDN84635.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
recombination factor protein RarA
L3_079_000G1_scaffold_425_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7691..8758
DNA (1068bp) protein (356aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=3 Tax=Parabacteroides RepID=K5ZKX8_9PORP
L3_079_000G1_scaffold_425_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8761..9684
DNA (924bp) protein (308aa)
4-phosphoerythronate dehydrogenase n=4 Tax=Parabacteroides RepID=A7AKW1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06427.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
3-phosphoglycerate dehydrogenase
L3_079_000G1_scaffold_425_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9701..10948
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K5Z5R4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06425.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000G1_scaffold_425_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11109..11735
DNA (627bp) protein (209aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=Parabacteroides RepID=A7AKV9_9PORP
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDD14396.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
haloacid dehalogenase-like hydrolase
L3_079_000G1_scaffold_425_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12401..13441)
DNA (1041bp) protein (347aa)
UDP-glucose 4-epimerase n=3 Tax=Parabacteroides RepID=K5ZSM8_9PORP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDD11631.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
UDP-glucose 4-epimerase
L3_079_000G1_scaffold_425_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13570..14142)
DNA (573bp) protein (191aa)
Electron transport complex, RnfABCDGE type, A subunit n=6 Tax=Parabacteroides RepID=A7AKV6_9PORP
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport complex protein RnfA
L3_079_000G1_scaffold_425_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14156..14740)
DNA (585bp) protein (195aa)
Electron transport complex, rnfabcdge type, E subunit n=2 Tax=Parabacteroides merdae RepID=K5Z4Z8_9PORP
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport complex protein RsxE
L3_079_000G1_scaffold_425_12
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14733..15347)
DNA (615bp) protein (205aa)
Electron transport complex, RnfABCDGE type, G subunit n=3 Tax=Parabacteroides RepID=A7AKV4_9PORP
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport complex protein RnfG
L3_079_000G1_scaffold_425_13
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15380..16339)
DNA (960bp) protein (320aa)
Electron transport complex, RnfABCDGE type, D subunit n=3 Tax=Parabacteroides merdae RepID=A7AKV3_9PORP
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport complex protein RnfD
L3_079_000G1_scaffold_425_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16352..17683)
DNA (1332bp) protein (444aa)
Electron transport complex, rnfabcdge type, C subunit n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6AUU5_9PORP
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
electron transport complex protein RnfC
L3_079_000G1_scaffold_425_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17695..18705)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZKY8_9PORP
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDN84623.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ferredoxin
L3_079_000G1_scaffold_425_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18716..19165)
DNA (450bp) protein (150aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5Z4Z4_9PORP
Positive regulator of sigma(E) RseC/MucC {ECO:0000313|EMBL:CDD11640.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19233..20813)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AHR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11641.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20878..21006)
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AVD8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11642.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000G1_scaffold_425_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21051..21194
DNA (144bp) protein (48aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AKU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84619.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
putative transporter permease protein
L3_079_000G1_scaffold_425_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21455..21994
DNA (540bp) protein (180aa)
Hypoxanthine phosphoribosyltransferase n=3 Tax=Parabacteroides RepID=A7AKU5_9PORP
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EDN84617.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypoxanthine phosphoribosyltransferase
L3_079_000G1_scaffold_425_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22127..22696
DNA (570bp) protein (190aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=4 Tax=Parabacteroides RepID=A7AKU4_9PORP
L3_079_000G1_scaffold_425_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22799..23962
DNA (1164bp) protein (388aa)
GTPase Obg n=2 Tax=Parabacteroides merdae RepID=K5Z5Q0_9PORP
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
obgE; GTPase ObgE
L3_079_000G1_scaffold_425_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23973..24776
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AKU2_9PORP
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_425_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25116..25310
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AKU1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84613.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
L3_079_000G1_scaffold_425_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25349..26041
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K5ZKZ8_9PORP
B3/4 domain protein {ECO:0000313|EMBL:CDD11649.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26182..26382
DNA (201bp) protein (67aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5Z4Y5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11650.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26535..26828
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AKT8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN84610.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_425_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26834..27124
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5YTQ6_9PORP
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_425_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27233..28768
DNA (1536bp) protein (512aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Ribonuclease Y n=4 Tax=Parabacteroides RepID=A7AKT6_9PORP
phosphodiesterase
L3_079_000G1_scaffold_425_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29418..32795)
DNA (3378bp) protein (1126aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Beta galactosidase small chain n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X7J5_9PORP
beta-galactosidase
Displaying items 1-30 of 48 in total

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