ggKbase home page

L3_079_000G1_scaffold_449

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_449_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..3725)
DNA (3723bp) protein (1241aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75969.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4081..4710)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56209.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative NADH-flavin reductase
L3_079_000G1_scaffold_449_3
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4931..5950)
DNA (1020bp) protein (340aa)
M42 glutamyl aminopeptidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZX1_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EDS75968.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
peptidase M42 family protein
L3_079_000G1_scaffold_449_4
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5996..6409)
DNA (414bp) protein (138aa)
AIG2-like family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZX0_9FIRM
AIG2-like family protein {ECO:0000313|EMBL:EDS75967.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_5
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6409..7050)
DNA (642bp) protein (214aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW9_9FIRM
L3_079_000G1_scaffold_449_6
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7060..8070)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75965.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
membrane protein
L3_079_000G1_scaffold_449_7
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8070..8744)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75964.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
membrane protein
L3_079_000G1_scaffold_449_8
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8869..10227
DNA (1359bp) protein (453aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZW6_9FIRM
L3_079_000G1_scaffold_449_9
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10286..11146)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27236.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_079_000G1_scaffold_449_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11088..12098)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7GFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03098.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
L3_079_000G1_scaffold_449_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12255..13748)
DNA (1494bp) protein (498aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Glycerol kinase n=5 Tax=Erysipelotrichaceae RepID=B0N3L6_9FIRM
glycerol kinase
L3_079_000G1_scaffold_449_12
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13750..14619)
DNA (870bp) protein (290aa)
Putative membrane protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDS75956.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_13
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14792..15934)
DNA (1143bp) protein (381aa)
YibE/F-like protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV8_9FIRM
YibE/F-like protein {ECO:0000313|EMBL:EDS75955.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15996..18665)
DNA (2670bp) protein (890aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV7_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDS75954.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Calcineurin-like phosphoesterase
L3_079_000G1_scaffold_449_15
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18816..19496)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75953.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_16
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19490..20155)
DNA (666bp) protein (222aa)
HAD hydrolase, family IA n=1 Tax=Coprobacillus sp. D7 RepID=C3RLB8_9FIRM
HAD hydrolase family IA {ECO:0000313|EMBL:CCZ35439.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_079_000G1_scaffold_449_17
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20485..21690)
DNA (1206bp) protein (402aa)
ATP-grasp domain protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV3_9FIRM
ATP-grasp domain protein {ECO:0000313|EMBL:EDS75950.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Biotin carboxylase
L3_079_000G1_scaffold_449_18
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21691..22443)
DNA (753bp) protein (251aa)
Putative esterase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV2_9FIRM
Putative esterase {ECO:0000313|EMBL:EDS75949.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
esterase
L3_079_000G1_scaffold_449_19
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22433..23632)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75948.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Biotin carboxylase
L3_079_000G1_scaffold_449_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23961..25313)
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZV0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDS75947.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
MATE efflux family protein
L3_079_000G1_scaffold_449_21
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25466..25924
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU9_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDS75946.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
transcriptional regulator, AsnC family
L3_079_000G1_scaffold_449_22
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26017..27477)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75945.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_23
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27702..29474)
DNA (1773bp) protein (591aa)
MutS domain V protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU7_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EDS75944.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
DNA mismatch repair protein
L3_079_000G1_scaffold_449_24
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29610..30395
DNA (786bp) protein (262aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU6_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDS75943.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Predicted transcriptional regulators
L3_079_000G1_scaffold_449_25
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30401..31210
DNA (810bp) protein (270aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS75942.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
L3_079_000G1_scaffold_449_26
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31212..31931
DNA (720bp) protein (240aa)
ABC-2 type transporter n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU4_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:EDS75941.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
ABC-2 type transporter.
L3_079_000G1_scaffold_449_27
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32011..32772)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75940.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_28
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32933..33592)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS75939.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
hypothetical protein
L3_079_000G1_scaffold_449_29
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33803..35251)
DNA (1449bp) protein (483aa)
Putative phage DNA packaging protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU1_9FIRM
Putative phage DNA packaging protein {ECO:0000313|EMBL:EDS75938.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
L3_079_000G1_scaffold_449_30
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35332..36513)
DNA (1182bp) protein (394aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDS75937.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDS75937.1};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
putative amino acid aminotransferase (EC:2.6.1.-)
Aminotransferase, class I/II n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1BZU0_9FIRM
Displaying items 1-30 of 54 in total

View Taxonomy