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L3_079_000G1_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_455_1
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

127..1344
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MAP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86704.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_455_2
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1388..2215
DNA (828bp) protein (276aa)
Predicted TIM-barrel enzyme, possibly a dioxygenase n=3 Tax=Clostridium RepID=D6DGJ5_CLOSC
Predicted TIM-barrel enzyme, possibly a dioxygenase
Predicted TIM-barrel enzyme possibly a dioxygenase {ECO:0000313|EMBL:CCY86702.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2316..2678
DNA (363bp) protein (121aa)
Predicted membrane protein n=2 Tax=Clostridium RepID=D6DGJ6_CLOSC
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBK76820.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_4
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3266..4870
DNA (1605bp) protein (535aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CH84_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE10920.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_079_000G1_scaffold_455_5
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5014..5463
DNA (450bp) protein (150aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:149 RepID=R5MAN4_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCY86694.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Transcriptional regulators
L3_079_000G1_scaffold_455_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5460..6827
DNA (1368bp) protein (456aa)
MATE efflux family protein n=3 Tax=Clostridium RepID=D4CH86_9CLOT
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK76823.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_7
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6917..7597
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MN28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86691.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_455_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7920..10511
DNA (2592bp) protein (864aa)
ATP-dependent chaperone ClpB n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGK0_CLOSC
ATP-dependent chaperone ClpB
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_9
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10608..10847
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CH90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86688.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_10
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11161..11973
DNA (813bp) protein (271aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Clostridium sp. CAG:149 RepID=R5MNV3_9CLOT
ABC-type spermidine/putrescine transport systems ATPase components {ECO:0000313|EMBL:CCY86687.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11978..13621
DNA (1644bp) protein (548aa)
ABC-type Fe3+ transport system permease component n=1 Tax=Clostridium sp. CAG:149 RepID=R5MN23_9CLOT
ABC-type Fe3+ transport system permease component {ECO:0000313|EMBL:CCY86686.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ABC-type Fe3+ transport system, permease component
L3_079_000G1_scaffold_455_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13761..14750
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CH94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86685.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ABC-type Fe3+ transport system, periplasmic component
L3_079_000G1_scaffold_455_13
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15202..16869
DNA (1668bp) protein (556aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGK6_CLOSC
L3_079_000G1_scaffold_455_14
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17151..18260
DNA (1110bp) protein (370aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBL35836.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBL35836.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
UDP-galactopyranose mutase n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MQ00_9FIRM
L3_079_000G1_scaffold_455_15
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18327..19187
DNA (861bp) protein (287aa)
LPS biosynthesis protein (EC:2.7.8.-)
LPS biosynthesis protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MNU9_9CLOT
LPS biosynthesis protein {ECO:0000313|EMBL:CCY86682.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_16
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19184..20482
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MN19_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86681.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_455_17
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20475..21566
DNA (1092bp) protein (364aa)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=3 Tax=Clostridiales RepID=D4MQ01_9FIRM
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:CCY86680.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_18
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21563..22318
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CHA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86679.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
nucleotidyl transferase
L3_079_000G1_scaffold_455_19
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22294..24486
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M595_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86678.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_079_000G1_scaffold_455_20
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24524..25363
DNA (840bp) protein (280aa)
Glycosyl transferase family 2 n=4 Tax=Clostridiales RepID=D6DGL2_CLOSC
Glycosyl transferase family 2.
Glycosyl transferase family 2 {ECO:0000313|EMBL:CCY86677.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_21
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25373..26383
DNA (1011bp) protein (337aa)
Glycosyltransferases, probably involved in cell wall biogenesis n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DGL3_CLOSC
Glycosyltransferases, probably involved in cell wall biogenesis
Glycosyltransferases, probably involved in cell wall biogenesis {ECO:0000313|EMBL:CBK76837.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_22
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26474..27181
DNA (708bp) protein (236aa)
Glycosyltransferases involved in cell wall biogenesis n=2 Tax=Clostridium RepID=D6DGL4_CLOSC
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCY86675.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_079_000G1_scaffold_455_23
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27178..27603
DNA (426bp) protein (142aa)
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4MQ05_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBL35841.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_079_000G1_scaffold_455_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27741..28295
DNA (555bp) protein (185aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBK76840.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBK76840.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=4 Tax=Clostridiales RepID=D4MQ06_9FIRM
L3_079_000G1_scaffold_455_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28348..29163
DNA (816bp) protein (272aa)
ABC-type polysaccharide/polyol phosphate export systems, permease component n=4 Tax=Clostridiales RepID=D4MQ07_9FIRM
ABC-type polysaccharide/polyol phosphate export systems, permease component
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29320..30534)
DNA (1215bp) protein (405aa)
Putative sodium/glutamate symporter n=2 Tax=Clostridium RepID=D4CHB1_9CLOT
Putative sodium/glutamate symporter {ECO:0000313|EMBL:CCY86670.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Na+/glutamate symporter
L3_079_000G1_scaffold_455_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30775..31344)
DNA (570bp) protein (190aa)
Acetyltransferase (GNAT) family n=3 Tax=Clostridium RepID=D6DGL8_CLOSC
Acetyltransferase (GNAT) family.
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBK76842.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_28
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32179..33795
DNA (1617bp) protein (539aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium sp. M62/1 RepID=D4CGK8_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFE11109.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
family 5 extracellular solute-binding protein
L3_079_000G1_scaffold_455_29
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33849..35993
DNA (2145bp) protein (715aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=2 Tax=Clostridium RepID=D6DGM0_CLOSC
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:CBK76844.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_079_000G1_scaffold_455_30
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36096..36968
DNA (873bp) protein (291aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component n=3 Tax=Clostridium RepID=D6DGM2_CLOSC
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:CBK76846.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Displaying items 1-30 of 54 in total

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