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L3_079_000G1_scaffold_475

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_475_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_079_000G1_scaffold_475_2
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(237..395)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9QN01_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36905.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_079_000G1_scaffold_475_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(580..915)
DNA (336bp) protein (112aa)
Sigma-54 modulation protein n=9 Tax=Bacteroidales RepID=A6LE89_PARD8
Ribosomal subunit interface protein {ECO:0000313|EMBL:EEY82585.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
sigma-54 modulation protein
L3_079_000G1_scaffold_475_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(869..1777)
DNA (909bp) protein (303aa)
Tyrosine recombinase XerC n=2 Tax=Bacteroides RepID=D0THI2_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
tyrosine type site-specific recombinase
L3_079_000G1_scaffold_475_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1851..2042)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=9 Tax=Bacteroidales RepID=RS21_PARD8
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_000G1_scaffold_475_6
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2127..3164)
DNA (1038bp) protein (346aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Methylthioribose-1-phosphate isomerase n=1 Tax=Parabacteroides sp. D13 RepID=C7XBU1_9PORP
mtnA; methylthioribose-1-phosphate isomerase
L3_079_000G1_scaffold_475_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3179..4036)
DNA (858bp) protein (286aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LE93_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB50449.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_079_000G1_scaffold_475_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4438..5073
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AMM6_9PORP
DNA-binding protein {ECO:0000313|EMBL:EFI08578.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_079_000G1_scaffold_475_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5118..6905
DNA (1788bp) protein (596aa)
Peptidase, M24 family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRK0_9BACE
Peptidase, M24 family protein {ECO:0000313|EMBL:EFI08577.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
aminopeptidase
L3_079_000G1_scaffold_475_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6916..7431
DNA (516bp) protein (172aa)
Acetyltransferase n=9 Tax=Bacteroidales RepID=A6LE96_PARD8
acetyltransferase
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:EEY82592.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_079_000G1_scaffold_475_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7589..8782
DNA (1194bp) protein (398aa)
Beta-lactamase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRJ8_9BACE
Beta-lactamase family protein {ECO:0000313|EMBL:KDS41935.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
beta-lactamase
L3_079_000G1_scaffold_475_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8819..9937
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82594.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_079_000G1_scaffold_475_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9965..11368
DNA (1404bp) protein (468aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=K6A714_9PORP
Peptidase C1-like family protein {ECO:0000313|EMBL:KDS41937.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
aminopeptidase
L3_079_000G1_scaffold_475_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11503..12663)
DNA (1161bp) protein (387aa)
3-deoxy-D-manno-octulosonic-acid transferase n=5 Tax=Bacteroidales RepID=D0THJ2_9BACE
3-deoxy-D-manno-octulosonic-acid transferase {ECO:0000313|EMBL:EFI08572.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
glycosyl transferase family protein
L3_079_000G1_scaffold_475_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12741..14258)
DNA (1518bp) protein (506aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=3 Tax=Bacteroidales RepID=D0THJ3_9BACE
L3_079_000G1_scaffold_475_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14354..16393
DNA (2040bp) protein (680aa)
7TM receptor with intracellular HD hydrolase n=2 Tax=Parabacteroides RepID=E1Z095_9PORP
7TM receptor with intracellular HD hydrolase {ECO:0000313|EMBL:EFK60690.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
membrane-associated HD superfamily hydrolase
L3_079_000G1_scaffold_475_17
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16500..17009)
DNA (510bp) protein (170aa)
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:EEU50274.1}; EC=3.1.3.48 {ECO:0000313|EMBL:EEU50274.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LEA9_PARD8
protein-tyrosine-phosphatase
L3_079_000G1_scaffold_475_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17051..19513)
DNA (2463bp) protein (821aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Primosomal protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IIV4_9PORP
primosomal protein N'
L3_079_000G1_scaffold_475_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19601..20215)
DNA (615bp) protein (205aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1Z098_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60693.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_079_000G1_scaffold_475_20
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20724..21578)
DNA (855bp) protein (285aa)
pantothenate kinase (EC:2.7.1.33)
Putative pantothenate kinase n=2 Tax=Bacteroides RepID=D0THK4_9BACE
Putative pantothenate kinase {ECO:0000313|EMBL:EEY82608.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_079_000G1_scaffold_475_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21708..23855)
DNA (2148bp) protein (716aa)
Methylmalonyl-CoA mutase N-terminal domain protein {ECO:0000313|EMBL:KDS58397.1}; EC=5.4.99.- {ECO:0000313|EMBL:KDS58397.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit n=9 Tax=Bacteroidales RepID=A6LEB4_PARD8
L3_079_000G1_scaffold_475_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23868..25727)
DNA (1860bp) protein (620aa)
Methylmalonyl-CoA mutase, small subunit n=2 Tax=Parabacteroides RepID=E1Z0A1_9PORP
Methylmalonyl-CoA mutase, small subunit {ECO:0000313|EMBL:EKN23740.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
methylmalonyl-CoA mutase, small subunit
L3_079_000G1_scaffold_475_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26165..27658
DNA (1494bp) protein (498aa)
NAD dependent epimerase/dehydratase family protein n=2 Tax=Parabacteroides RepID=E1Z0A2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23739.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_079_000G1_scaffold_475_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27785..28000
DNA (216bp) protein (72aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LEB7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50266.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_000G1_scaffold_475_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28106..28954
DNA (849bp) protein (283aa)
AP endonuclease, family 2 n=1 Tax=Parabacteroides sp. 20_3 RepID=E1Z0A4_9PORP
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:KDS46198.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
D-tagatose 3-epimerase
L3_079_000G1_scaffold_475_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29042..30247)
DNA (1206bp) protein (402aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Parabacteroides RepID=E1Z0A5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23736.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_079_000G1_scaffold_475_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30329..33682)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0A6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23735.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
OmpA-like protein
L3_079_000G1_scaffold_475_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34119..37409
DNA (3291bp) protein (1097aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z0A7_9PORP
OmpA-like protein
Uncharacterized protein {ECO:0000313|EMBL:EKN23734.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_079_000G1_scaffold_475_29
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37470..39473)
DNA (2004bp) protein (668aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THL3_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEY82617.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
helicase
L3_079_000G1_scaffold_475_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39609..40559
DNA (951bp) protein (317aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THL4_9BACE
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:EEY82618.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
integral membrane protein
Displaying items 1-30 of 47 in total

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