ggKbase home page

L3_079_000G1_scaffold_489

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_489_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

248..424
DNA (177bp) protein (59aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=A7AFS1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14704.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_079_000G1_scaffold_489_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

453..1103
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WTP6_9PORP
ribulose-phosphate 3-epimerase
L3_079_000G1_scaffold_489_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1258..2538
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y8H7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14702.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
competence protein
L3_079_000G1_scaffold_489_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2553..3626
DNA (1074bp) protein (358aa)
DHHA1 domain protein n=4 Tax=Parabacteroides RepID=A7AFR8_9PORP
DHHA1 domain protein {ECO:0000313|EMBL:EDN86894.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
exopolyphosphatase-like protein
L3_079_000G1_scaffold_489_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3681..4262
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AFR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86893.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_489_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4273..5661
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase n=2 Tax=Parabacteroides merdae RepID=A7AFR6_9PORP
Phosphoglucosamine mutase {ECO:0000313|EMBL:EDN86892.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
phosphoglucomutase
L3_079_000G1_scaffold_489_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5957..7312
DNA (1356bp) protein (452aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AFR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86890.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_489_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7290..8267
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCK0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14061.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_079_000G1_scaffold_489_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8280..11132
DNA (2853bp) protein (951aa)
Excinuclease ABC subunit A n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZTD9_9PORP
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
excinuclease ABC subunit A
L3_079_000G1_scaffold_489_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11129..11347
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFR1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14064.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_489_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11351..11959
DNA (609bp) protein (203aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6A8Y4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14593.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000G1_scaffold_489_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12008..13201
DNA (1194bp) protein (398aa)
Transporter CPA2 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6N4_9PORP
Transporter CPA2 family {ECO:0000313|EMBL:CDD14067.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ exchange protein
L3_079_000G1_scaffold_489_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13274..14638
DNA (1365bp) protein (455aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRY6_9PORP
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ antiporter
L3_079_000G1_scaffold_489_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14625..15512
DNA (888bp) protein (296aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=A7AFQ7_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDN86883.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_489_15
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15787..21318
DNA (5532bp) protein (1844aa)
Alpha-2-macroglobulin family protein n=2 Tax=Parabacteroides merdae RepID=A7AFQ6_9PORP
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EDN86882.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane protein
L3_079_000G1_scaffold_489_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21436..21909)
DNA (474bp) protein (158aa)
Putative GAF domain-containing protein A n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y1J1_9PORP
Putative GAF domain-containing protein A {ECO:0000313|EMBL:CDD12352.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
GAF domain-containing protein
L3_079_000G1_scaffold_489_17
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21972..23318
DNA (1347bp) protein (449aa)
MATE efflux family protein n=3 Tax=Parabacteroides merdae RepID=A7AFQ4_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EDN86880.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Na+-driven multidrug efflux pump
L3_079_000G1_scaffold_489_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23361..24002
DNA (642bp) protein (214aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86879.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_079_000G1_scaffold_489_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24176..24946
DNA (771bp) protein (257aa)
Putative thiazole biosynthetic enzyme n=3 Tax=Parabacteroides RepID=A7AFQ2_9PORP
Putative thiazole biosynthetic enzyme {ECO:0000256|HAMAP-Rule:MF_00304}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ribulose-1,5-biphosphate synthetase
L3_079_000G1_scaffold_489_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25576..25953
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6AFR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN14583.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_079_000G1_scaffold_489_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26047..27264
DNA (1218bp) protein (406aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YL98_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN14582.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
cation efflux system protein
L3_079_000G1_scaffold_489_22
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27288..30404
DNA (3117bp) protein (1039aa)
CzcA family heavy metal efflux pump n=2 Tax=Parabacteroides merdae RepID=K6C579_9PORP
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKN14581.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AcrB/AcrD/AcrF family protein cation efflux system protein
L3_079_000G1_scaffold_489_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30401..31582
DNA (1182bp) protein (394aa)
Outer membrane efflux protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WZL9_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:CDD14765.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_079_000G1_scaffold_489_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31752..34061
DNA (2310bp) protein (770aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BIJ6_9PORP
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDN86872.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_079_000G1_scaffold_489_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34065..36365
DNA (2301bp) protein (767aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BHZ8_9PORP
Putative alpha-1,2-mannosidase {ECO:0000313|EMBL:EDN86871.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
glycoside hydrolase
L3_079_000G1_scaffold_489_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36385..36735
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AFP4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86870.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_079_000G1_scaffold_489_27
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36814..37356
DNA (543bp) protein (181aa)
Transcription termination/antitermination factor NusG n=3 Tax=Parabacteroides RepID=A7AFP3_9PORP
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EDN86869.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
transcription termination/antitermination factor NusG
L3_079_000G1_scaffold_489_28
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37367..38890)
DNA (1524bp) protein (508aa)
Cobyric acid synthase n=2 Tax=Parabacteroides merdae RepID=A7AFP2_9PORP
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
cobyric acid synthase
L3_079_000G1_scaffold_489_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38887..39411)
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=2 Tax=Parabacteroides merdae RepID=A7AFP1_9PORP
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN86867.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
GNAT family acetyltransferase
L3_079_000G1_scaffold_489_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40024..40614
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A906_9PORP
Putative ATP synthase, subunit E {ECO:0000313|EMBL:EDN86863.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP synthase subunit E
Displaying items 1-30 of 74 in total

View Taxonomy