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L3_079_000G1_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_645_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..467
DNA (465bp) protein (155aa)
Integrase, catalytic region n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GN60_BIFLS
Integrase, catalytic region
Integrase core domain protein {ECO:0000313|EMBL:CEF04908.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_079_000G1_scaffold_645_2
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3023..4489
DNA (1467bp) protein (489aa)
Chain length regulator/ Tyrosine-protein kinase {ECO:0000313|EMBL:KFI83920.1}; EC=2.7.10.2 {ECO:0000313|EMBL:KFI83920.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
chain length regulator/Tyrosine-protein kinase (EC:2.7.10.2)
Chain length determinant protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SAZ2_9BIFI
L3_079_000G1_scaffold_645_3
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4797..6329
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FH23_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI85035.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Hypothetical protein
L3_079_000G1_scaffold_645_4
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6790..8415
DNA (1626bp) protein (542aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:KFI85036.1}; EC=2.7.8.6 {ECO:0000313|EMBL:KFI85036.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
cspD; undecaprenyl-phosphate sugar phosphotransferase CspD (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=2 Tax=Bifidobacterium dentium RepID=E0Q4N7_9BIFI
L3_079_000G1_scaffold_645_5
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8676..10496
DNA (1821bp) protein (607aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A7A7K3_BIFAD
Uncharacterized protein {ECO:0000313|EMBL:KFI61827.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
chemotaxis protein
L3_079_000G1_scaffold_645_6
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10509..12227)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Scardovia wiggsiae F0424 RepID=J0LP57_9BIFI
MFS family major facilitator transporter, multidrug:cation symporter {ECO:0000313|EMBL:KFI85040.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
MFS family major facilitator transporter, multidrug:cation symporter
L3_079_000G1_scaffold_645_7
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12627..12929)
DNA (303bp) protein (101aa)
Xre-type transcriptional regulator n=2 Tax=Bifidobacterium RepID=B3DTN2_BIFLD
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:KFI83913.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Xre family transcriptional regulator
L3_079_000G1_scaffold_645_8
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13108..14115)
DNA (1008bp) protein (336aa)
G5 domain-containing protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RQ74_9BIFI
G5 domain-containing protein {ECO:0000313|EMBL:KFI61830.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
G5 domain-containing protein
L3_079_000G1_scaffold_645_9
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14230..14589)
DNA (360bp) protein (120aa)
Thioredoxin n=2 Tax=Bifidobacterium adolescentis RepID=A1A347_BIFAA
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
thioredoxin
L3_079_000G1_scaffold_645_10
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14671..15378
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCP6_9BIFI
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KFI85043.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L3_079_000G1_scaffold_645_11
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15402..16253
DNA (852bp) protein (284aa)
Putative alpha beta hydrolase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RQ79_9BIFI
Alpha/beta hydrolase {ECO:0000313|EMBL:KFI61833.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
putative alpha beta hydrolase
L3_079_000G1_scaffold_645_12
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16255..17346
DNA (1092bp) protein (364aa)
NUDIX family hydrolase {ECO:0000313|EMBL:KFI61834.1}; EC=3.6.1.22 {ECO:0000313|EMBL:KFI61834.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Possible phosphohydrolase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZT4_BIFBP
NADH pyrophosphatase
L3_079_000G1_scaffold_645_13
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17406..19016
DNA (1611bp) protein (537aa)
ErfK/YbiS/YcfS/YnhG n=2 Tax=Bifidobacterium dentium RepID=B1SB86_9BIFI
ErfK/YbiS/YcfS/YnhG superfamily protein {ECO:0000313|EMBL:KFI83907.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_645_14
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19139..19540
DNA (402bp) protein (134aa)
Glycine cleavage system H protein n=5 Tax=Bifidobacterium breve RepID=F6C600_BIFBA
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Glycine cleavage system H protein
L3_079_000G1_scaffold_645_15
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19652..20821
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NSM8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI61837.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
ABC transporter ATP-binding protein
L3_079_000G1_scaffold_645_16
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20818..23451
DNA (2634bp) protein (878aa)
Protease II {ECO:0000313|EMBL:KFI83904.1}; EC=3.4.21.83 {ECO:0000313|EMBL:KFI83904.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XVE7_9BIFI
peptidase S9
L3_079_000G1_scaffold_645_17
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23524..24564
DNA (1041bp) protein (347aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:KFI85050.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KFI85050.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=6 Tax=Bifidobacterium RepID=E3EPU2_BIFBS
L3_079_000G1_scaffold_645_18
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24909..26336
DNA (1428bp) protein (476aa)
Lipoate-protein ligase A {ECO:0000313|EMBL:KFI61840.1}; EC=2.7.7.63 {ECO:0000313|EMBL:KFI61840.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
lplA; lipoate-protein ligase A (EC:2.7.7.63)
LplA Lipoate-protein ligase A n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NZU0_BIFBP
L3_079_000G1_scaffold_645_19
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26686..27399
DNA (714bp) protein (238aa)
Cyclic nucleotide-binding domain protein n=6 Tax=Bifidobacterium breve RepID=F6C5Z5_BIFBA
Transcription regulator, crp family {ECO:0000313|EMBL:KFI85053.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Transcription regulator, crp family
L3_079_000G1_scaffold_645_20
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27506..29749
DNA (2244bp) protein (748aa)
Penicillin-binding protein {ECO:0000313|EMBL:KFI83900.1}; EC=2.4.1.129 {ECO:0000313|EMBL:KFI83900.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Transglycosylase n=2 Tax=Bifidobacterium dentium RepID=E0Q4R8_9BIFI
penicillin-binding protein
L3_079_000G1_scaffold_645_21
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29875..31200
DNA (1326bp) protein (442aa)
Xenobiotic reductase A {ECO:0000313|EMBL:KFI85055.1}; EC=1.6.99.1 {ECO:0000313|EMBL:KFI85055.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Oxidoreductase, FAD/FMN-binding protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CU56_BIFBR
NADH-dependent flavin oxidoreductase
L3_079_000G1_scaffold_645_22
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31233..32381)
DNA (1149bp) protein (383aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Dihydroorotate dehydrogenase 2 n=2 Tax=Bifidobacterium RepID=C0BRS8_9BIFI
pyrD2; PyrD2 dihydroorotate dehydrogenase 2
L3_079_000G1_scaffold_645_23
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32636..33382
DNA (747bp) protein (249aa)
DeoR-like helix-turn-helix domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZJ9_BIFLN
DeoR family Bacterial regulatory protein {ECO:0000313|EMBL:KFI85057.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Transcriptional regulator, DeoR family
L3_079_000G1_scaffold_645_24
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33388..34638
DNA (1251bp) protein (417aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:KFI85058.1}; EC=2.7.7.12 {ECO:0000313|EMBL:KFI85058.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
galT; galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q617_BIFDB
L3_079_000G1_scaffold_645_25
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34675..35925
DNA (1251bp) protein (417aa)
galK; galactokinase (EC:2.7.1.6)
Galactokinase n=2 Tax=Bifidobacterium dentium RepID=E0Q4S5_9BIFI
Galactokinase {ECO:0000256|SAAS:SAAS00025843}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
L3_079_000G1_scaffold_645_26
Jonesia denitrificans, Jonesia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36076..37248)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) RepID=C7QYN7_JONDD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV07884.1}; Flags: Precursor;; TaxID=471856 species="Bacteria; Actinobacteria; Micrococcales; Jonesiaceae; Jonesia.;" source="Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134); (Listeria denitrificans).;"
L3_079_000G1_scaffold_645_27
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37428..37586
DNA (159bp) protein (53aa)
RelB antitoxin {ECO:0000313|EMBL:KFI85060.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L3_079_000G1_scaffold_645_28
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37829..38053
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7UW97_EEGSY
Toxin-antitoxin system, antitoxin component, PHD family {ECO:0000313|EMBL:KFI81689.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_645_29
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38115..38426
DNA (312bp) protein (104aa)
Putative death on curing protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A3Q3_BIFAA
putative death on curing protein
Putative death on curing protein {ECO:0000313|EMBL:BAF40336.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_079_000G1_scaffold_645_30
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38521..38793
DNA (273bp) protein (91aa)
UPF0237 protein D805_0445 n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RQA4_9BIFI
UPF0237 protein BSAE_0638 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
Displaying items 1-30 of 57 in total

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