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L3_079_000G1_scaffold_682

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_682_1
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..784
DNA (783bp) protein (261aa)
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:KFI83126.1}; EC=3.6.3.20 {ECO:0000313|EMBL:KFI83126.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
ATP binding protein of ABC transporter for sugars n=2 Tax=Bifidobacterium adolescentis RepID=A1A3U1_BIFAA
ATP binding protein of ABC transporter for sugars
L3_079_000G1_scaffold_682_2
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

910..2445
DNA (1536bp) protein (512aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0QA17_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI60220.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
lipopolysaccharide kinase
L3_079_000G1_scaffold_682_3
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2688..3854
DNA (1167bp) protein (389aa)
AAA domain protein n=3 Tax=Bifidobacterium longum RepID=I3ASM0_BIFLN
AAA domain protein {ECO:0000313|EMBL:KFI83124.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
L3_079_000G1_scaffold_682_4
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3899..4972
DNA (1074bp) protein (358aa)
Transcriptional regulator, LacI family n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SG20_9BIFI
Bacterial regulatory protein, LacI family {ECO:0000313|EMBL:KFI85662.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
bacterial regulatory protein, LacI family
L3_079_000G1_scaffold_682_5
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5153..6433
DNA (1281bp) protein (427aa)
ABC transporter, solute-binding protein n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1SCF9_9BIFI
Sugar ABC transporter binding protein {ECO:0000313|EMBL:KFI85661.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
sugar ABC transporter binding protein
L3_079_000G1_scaffold_682_6
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6436..7356
DNA (921bp) protein (307aa)
ABC transporter sugar permease n=3 Tax=Bifidobacterium RepID=A1A2Y7_BIFAA
Transmembrane permease MsmF {ECO:0000313|EMBL:KFI60223.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
malF; sugar ABC transporter permease
L3_079_000G1_scaffold_682_7
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7371..8246
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CQI4_BIFBR
sn-glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:KFI60224.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Sugar ABC transporter, permease protein
L3_079_000G1_scaffold_682_8
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8268..9455
DNA (1188bp) protein (396aa)
Glycoside hydrolase, family 1 {ECO:0000313|EMBL:KFI85658.1}; EC=3.2.1.21 {ECO:0000313|EMBL:KFI85658.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Glycosyl hydrolase, family 1 n=1 Tax=Alloscardovia omnicolens F0580 RepID=U1R6H7_9BIFI
Beta-glucosidase
L3_079_000G1_scaffold_682_9
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9669..10658)
DNA (990bp) protein (330aa)
SpoU rRNA methylase family protein {ECO:0000313|EMBL:KFI85657.1}; EC=2.1.1.185 {ECO:0000313|EMBL:KFI85657.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
RNA methyltransferase TrmH family group 3 n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GLS6_9BIFI
RNA methyltransferase, TrmH family, group 3
L3_079_000G1_scaffold_682_10
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10682..11113)
DNA (432bp) protein (144aa)
Transporter, probably Formate efflux permease n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IJA1_BIFAP
Formate/nitrite transporter {ECO:0000313|EMBL:KFI60227.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
transporter, probably Formate efflux permease
L3_079_000G1_scaffold_682_11
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11128..11286)
DNA (159bp) protein (53aa)
Transporter, probably Formate efflux permease n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4IJA1_BIFAP
Formate/nitrite transporter {ECO:0000313|EMBL:KFI60227.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
transporter, probably Formate efflux permease
L3_079_000G1_scaffold_682_12
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11582..14548
DNA (2967bp) protein (989aa)
Cation-transporting ATPase PacL {ECO:0000313|EMBL:KFI83116.1}; EC=3.6.3.8 {ECO:0000313|EMBL:KFI83116.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
ATPase P (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VC85_BIFBI
L3_079_000G1_scaffold_682_13
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14686..15267)
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5B1_9BIFI
deoxycytidine triphosphate deaminase
L3_079_000G1_scaffold_682_14
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15743..16501
DNA (759bp) protein (253aa)
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BVK6_9BIFI
Phospholipase/carboxylesterase {ECO:0000313|EMBL:KFI83114.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
phospholipase/carboxylesterase
L3_079_000G1_scaffold_682_15
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16508..18583)
DNA (2076bp) protein (692aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXM9_9BIFI
Na+/H+ antiporter {ECO:0000313|EMBL:KFI83113.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
Na+/H+ antiporter
L3_079_000G1_scaffold_682_16
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18703..19155
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
CMP/dCMP deaminase, zinc-binding protein n=10 Tax=Bifidobacterium RepID=D6ZX14_BIFLJ
cumB; cumb
L3_079_000G1_scaffold_682_17
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19350..21566
DNA (2217bp) protein (739aa)
Alpha-galactosidase {ECO:0000313|EMBL:KFI60233.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KFI60233.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
aga; alpha-galactosidase (EC:3.2.1.22)
Aga Alpha-galactosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7M1_BIFDB
L3_079_000G1_scaffold_682_18
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21707..22921)
DNA (1215bp) protein (405aa)
ROK family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ARB0_BIFLN
NagC family transcriptional regulator {ECO:0000313|EMBL:KFI60234.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
transcriptional regulator
L3_079_000G1_scaffold_682_19
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23115..24434
DNA (1320bp) protein (440aa)
Raffinose-binding protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7L9_BIFDB
Sugar binding protein of ABC transporter system {ECO:0000313|EMBL:KFI60235.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
raffinose-binding protein
L3_079_000G1_scaffold_682_20
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24444..25343
DNA (900bp) protein (300aa)
Raffinose transport system permease protein n=2 Tax=Bifidobacterium dentium RepID=D2Q7L8_BIFDB
Raffinose transporter permease {ECO:0000313|EMBL:KFI60236.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
sugar ABC transporter permease
L3_079_000G1_scaffold_682_21
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25343..26218
DNA (876bp) protein (292aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0QA30_9BIFI
Sugar ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:KFI60237.1}; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
raffinose transporter permease
L3_079_000G1_scaffold_682_22
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26414..27466)
DNA (1053bp) protein (351aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWQ8_BIFLN
Transcriptional regulator {ECO:0000313|EMBL:KFI85645.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
LacI family response repressor
L3_079_000G1_scaffold_682_23
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27791..29131
DNA (1341bp) protein (447aa)
MalE-type ABC sugar transport system periplasmic component n=9 Tax=Bifidobacterium longum RepID=B3DP78_BIFLD
MalE-type ABC sugar transport system periplasmic component {ECO:0000313|EMBL:KFI85644.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
ABC transporter substrate-binding protein
L3_079_000G1_scaffold_682_24
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29138..30079
DNA (942bp) protein (314aa)
Permease protein of ABC transporter system for sugars n=11 Tax=Bifidobacterium RepID=F9XZU1_BIFBU
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KFI85643.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Permease protein of ABC transporter system for sugars
L3_079_000G1_scaffold_682_25
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30081..30905
DNA (825bp) protein (275aa)
MalG-type ABC sugar transport system permease component n=12 Tax=Bifidobacterium RepID=B3DP80_BIFLD
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:KFI85642.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
ABC transporter permease
L3_079_000G1_scaffold_682_26
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30984..32654
DNA (1671bp) protein (557aa)
Alpha-1,4-glucosidase {ECO:0000313|EMBL:KFI85641.1}; EC=3.2.1.93 {ECO:0000313|EMBL:KFI85641.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
Alpha-1,4-glucosidase (EC:3.2.1.20)
Alpha-1,4-glucosidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZT9_BIFBU
L3_079_000G1_scaffold_682_27
Bifidobacterium gallinarum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32983..35427
DNA (2445bp) protein (815aa)
Raffinose synthase {ECO:0000313|EMBL:KFI60238.1}; EC=2.4.1.82 {ECO:0000313|EMBL:KFI60238.1};; TaxID=78344 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallinarum.;"
Raffinose synthase or seed imbibition protein Sip1/Alpha-galactosidase (EC:2.4.1.82 3.2.1.22)
Raffinose synthase or seed imbibition protein Sip1/Alpha-galactosidase n=1 Tax=Bifidobacterium breve (strain NCIMB 8807 / UCC2003) RepID=F9XZT8_BIFBU
L3_079_000G1_scaffold_682_28
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35916..37745
DNA (1830bp) protein (610aa)
Glucan 1,6-alpha-glucosidase {ECO:0000313|EMBL:KFI85639.1}; EC=3.2.1.10 {ECO:0000313|EMBL:KFI85639.1};; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
alpha-amylase n=1 Tax=Metascardovia criceti RepID=UPI00037CD490
alpha-glucosidase
L3_079_000G1_scaffold_682_29
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37899..39173
DNA (1275bp) protein (425aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:KFI83104.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KFI83104.1};; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
tdcB; TdcB Threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=3 Tax=Bifidobacterium dentium RepID=E0QA37_9BIFI
L3_079_000G1_scaffold_682_30
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39511..40986
DNA (1476bp) protein (492aa)
ATPase AAA {ECO:0000313|EMBL:KFJ02471.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KFJ02471.1};; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZI17_9FIRM
Displaying items 1-30 of 64 in total

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