ggKbase home page

L3_079_000G1_scaffold_701

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_701_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..882
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HS06_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY99507.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
hypothetical protein
L3_079_000G1_scaffold_701_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1372..1584
DNA (213bp) protein (71aa)
Y4mF family transcriptional regulator n=6 Tax=Bacteroides RepID=I3HS07_BACFG
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAD47548.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_000G1_scaffold_701_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1581..1910
DNA (330bp) protein (110aa)
Possible HipA-like protein n=10 Tax=Bacteroides RepID=E1WLI6_BACF6
HipA-like protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47547.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_000G1_scaffold_701_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1903..2913
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6YVA9_9BACE
HipA-like N-terminal domain protein {ECO:0000313|EMBL:EYB11288.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
hypothetical protein
L3_079_000G1_scaffold_701_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2916..3833)
DNA (918bp) protein (306aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=C6I5T7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY99502.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative AraC-family regulatory protein
L3_079_000G1_scaffold_701_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3851..5098)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=C6I5T8_9BACE
putative transmembrane transport protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99501.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_701_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5070..6086)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D1JS26_9BACE
Putative aBC transporter ATP-binding protein {ECO:0000313|EMBL:EXY92288.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative ABC transporter ATP-binding protein
L3_079_000G1_scaffold_701_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6108..6935)
DNA (828bp) protein (276aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=D1JS25_9BACE
putative ABC transporter ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99499.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_701_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7029..7937
DNA (909bp) protein (303aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64Y85_BACFR
putative transmembrane permease
Triose-phosphate Transporter family protein {ECO:0000313|EMBL:EXZ80037.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_000G1_scaffold_701_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7969..9060)
DNA (1092bp) protein (364aa)
LAO/AO transport system ATPase n=14 Tax=Bacteroides RepID=C6I5U2_9BACE
argK; putative Lao/Ao arginine transport system kinase
LAO/AO transport system ATPase {ECO:0000313|EMBL:EIY99497.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_701_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9069..10157)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WLI0_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ01266.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_079_000G1_scaffold_701_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10325..10744)
DNA (420bp) protein (140aa)
Possible oxidoreductase n=6 Tax=Bacteroides RepID=E1WLH9_BACF6
oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:EIY99495.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_701_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10752..11876)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WLH8_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW21341.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_079_000G1_scaffold_701_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11896..12246)
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=E1WLH7_BACF6
hypothetical protein
NVEALA family protein {ECO:0000313|EMBL:EXZ55287.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_079_000G1_scaffold_701_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12424..18204)
DNA (5781bp) protein (1927aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9K3Q4_BACFG
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:EXZ74620.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_079_000G1_scaffold_701_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18427..19167
DNA (741bp) protein (247aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WLH5_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY99491.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_701_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19164..21914
DNA (2751bp) protein (917aa)
Putative TonB-dependent outer membrane receptor protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WLH4_BACF6
putative TonB-dependent outer membrane receptor protein
TonB dependent receptor family protein {ECO:0000313|EMBL:EXZ84650.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
L3_079_000G1_scaffold_701_18
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21919..23070
DNA (1152bp) protein (384aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JS15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ26229.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_079_000G1_scaffold_701_19
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23092..24774
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JS14_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ26228.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L3_079_000G1_scaffold_701_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25428..26885)
DNA (1458bp) protein (486aa)
Aminoacyl-histidine dipeptidase n=2 Tax=Bacteroides fragilis RepID=I3HS26_BACFG
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EIY99487.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
pepD; putative aminoacyl-histidine dipeptidase
L3_079_000G1_scaffold_701_21
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26943..27041
DNA (99bp) protein (33aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PZ06_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD39962.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_000G1_scaffold_701_22
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27051..28052)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=I3HS28_BACFG
Uncharacterized protein {ECO:0000313|EMBL:CDD39963.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
putative transmembrane protein
L3_079_000G1_scaffold_701_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


28102..28920
DNA (819bp) protein (273aa)
ksgA; putative dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
Ribosomal RNA small subunit methyltransferase A n=12 Tax=Bacteroides RepID=RSMA_BACFN
L3_079_000G1_scaffold_701_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29021..30361
DNA (1341bp) protein (447aa)
Magnesium transporter n=14 Tax=Bacteroides RepID=C6I5V4_9BACE
putative transmembrane Mg2+ transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_079_000G1_scaffold_701_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30480..32330
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64Y99_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47527.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_000G1_scaffold_701_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33044..33403
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=13 Tax=Bacteroides RepID=E1WLG6_BACF6
hypothetical protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L3_079_000G1_scaffold_701_27
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33452..35446
DNA (1995bp) protein (665aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
ATP-dependent zinc metalloprotease FtsH n=12 Tax=Bacteroides RepID=E1WLG5_BACF6
putative transmembrane AAA-metalloprotease FtsH
L3_079_000G1_scaffold_701_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35462..36301
DNA (840bp) protein (280aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Phosphatidate cytidylyltransferase n=11 Tax=Bacteroides RepID=E1WLG4_BACF6
cdsA; putative phosphatidate cytidylyltransferase
L3_079_000G1_scaffold_701_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36416..37159)
DNA (744bp) protein (248aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=Q5LHD5_BACFN
hypothetical protein
NigD-like family protein {ECO:0000313|EMBL:EYB11264.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_079_000G1_scaffold_701_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37247..38380)
DNA (1134bp) protein (378aa)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EXY42283.1}; EC=2.4.1.182 {ECO:0000313|EMBL:EXY42283.1};; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
Lipid-A-disaccharide synthase n=6 Tax=Bacteroides RepID=Q64YA4_BACFR
lpxB; putative lipid-A-disaccharide synthase
Displaying items 1-30 of 133 in total

View Taxonomy