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L3_079_000G1_scaffold_1812

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1812_1
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35..1174)
DNA (1140bp) protein (380aa)
Tyrosine type site-specific recombinase n=7 Tax=Bacteroides RepID=Q64SL3_BACFR
tyrosine type site-specific recombinase
Uncharacterized protein {ECO:0000313|EMBL:CDD44351.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_000G1_scaffold_1812_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1190..1783
DNA (594bp) protein (198aa)
Multiple promoter invertase n=8 Tax=Bacteroides RepID=E1WR93_BACF6
mpi; multiple promoter invertase
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EYA38441.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
L3_079_000G1_scaffold_1812_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1922..2503)
DNA (582bp) protein (194aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=Q64SL5_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49514.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_000G1_scaffold_1812_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2597..3097
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Probable thiol peroxidase n=14 Tax=Bacteroides RepID=E1WR91_BACF6
tpx; putative thiol peroxidase
L3_079_000G1_scaffold_1812_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3243..3860)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64SL7_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYE47186.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_000G1_scaffold_1812_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3918..4154)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q64SL8_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD49511.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_079_000G1_scaffold_1812_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4233..4685)
DNA (453bp) protein (151aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6I5Z4_9BACE
putative alkaline phosphatase
Uncharacterized protein {ECO:0000313|EMBL:EXY73893.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
L3_079_000G1_scaffold_1812_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4818..6254)
DNA (1437bp) protein (479aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=Q5LBP9_BACFN
hypothetical protein
TPR repeat family protein {ECO:0000313|EMBL:EYE47184.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L3_079_000G1_scaffold_1812_9
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6353..8092)
DNA (1740bp) protein (580aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LW73_9BACE
L3_079_000G1_scaffold_1812_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8163..9014)
DNA (852bp) protein (284aa)
Phosphate binding protein n=1 Tax=Bacteroides sp. 3_2_5 RepID=C6I5Z1_9BACE
putative phosphate-related ABC transport system, exported protein
Phosphate binding protein {ECO:0000313|EMBL:EIY92580.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_079_000G1_scaffold_1812_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9300..10496
DNA (1197bp) protein (399aa)
Phosphate ABC transporter, permease PstC n=13 Tax=Bacteroides RepID=C6I5Z0_9BACE
putative phosphate-related ABC transport system, membrane protein
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EKA85115.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_000G1_scaffold_1812_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10498..11373
DNA (876bp) protein (292aa)
Phosphate transport system permease protein n=14 Tax=Bacteroides RepID=E1WR84_BACF6
pstA; phosphate transport system permease protein
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EKA85116.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_079_000G1_scaffold_1812_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11409..12170
DNA (762bp) protein (254aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
Phosphate import ATP-binding protein PstB n=14 Tax=Bacteroides RepID=PSTB_BACFN
pstB; phosphate import ATP-binding protein
L3_079_000G1_scaffold_1812_14
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12246..12935
DNA (690bp) protein (230aa)
Phosphate-specific transport system accessory protein PhoU n=14 Tax=Bacteroides RepID=E1WR82_BACF6
putative phosphate transport chemotaxis-related protein
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_000G1_scaffold_1812_15
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13062..13151
DNA (90bp) protein (30aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PYP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD44368.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_000G1_scaffold_1812_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13333..13935
DNA (603bp) protein (201aa)
ribE; riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EXZ53172.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EXZ53172.1};; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
Riboflavin synthase alpha chain n=14 Tax=Bacteroides RepID=E1WR81_BACF6
L3_079_000G1_scaffold_1812_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13966..14505
DNA (540bp) protein (180aa)
Nitroreductase family protein n=4 Tax=Bacteroides RepID=D1JTS8_9BACE
Nitroreductase family protein {ECO:0000313|EMBL:EXY90066.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
putative NAD(P)H nitroreductase
L3_079_000G1_scaffold_1812_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14750..16069)
DNA (1320bp) protein (440aa)
YihY family protein n=7 Tax=Bacteroides RepID=C6I5Y4_9BACE
putative tRNA processing ribonuclease
YihY family inner membrane domain protein {ECO:0000313|EMBL:EXY90070.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_079_000G1_scaffold_1812_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16818..18020
DNA (1203bp) protein (401aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C6I5Y2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY92571.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
putative peptidase
L3_079_000G1_scaffold_1812_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18034..19185
DNA (1152bp) protein (384aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I3HLA7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA85124.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
muconate cycloisomerase
L3_079_000G1_scaffold_1812_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19217..20551
DNA (1335bp) protein (445aa)
Transglutaminase-like protein n=7 Tax=Bacteroides RepID=D1JTT3_9BACE
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:EYA38424.1}; TaxID=1339279 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 20793-3.;"
putative cysteine proteases
L3_079_000G1_scaffold_1812_22
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20857..22404
DNA (1548bp) protein (516aa)
Serine protease n=13 Tax=Bacteroides RepID=Q64SN5_BACFR
putative heat shock-related protease
Putative heat shock-related protease {ECO:0000313|EMBL:CDD44378.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_079_000G1_scaffold_1812_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22725..23585
DNA (861bp) protein (287aa)
RNA polymerase sigma factor RpoD n=19 Tax=Bacteroides RepID=Q64SN7_BACFR
sigA; putative sigma factor A
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EYB08979.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Displaying 23 items

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