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L3_079_000G1_scaffold_1858

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1858_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(94..276)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GJM0_BACFG
Sugar-transfer associated ATP-grasp family protein {ECO:0000313|EMBL:EYA19976.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_079_000G1_scaffold_1858_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(290..1351)
DNA (1062bp) protein (354aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1H1F3_BACFG
3-oxoacyl-[acyl-carrier-protein] synthase III family protein {ECO:0000313|EMBL:EYA19975.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
3-oxoacyl-(acyl-carrier-protein) synthase III
L3_079_000G1_scaffold_1858_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1339..2784)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1G5X4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA89619.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
L3_079_000G1_scaffold_1858_4
unknown

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comp(2777..2923)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_079_000G1_scaffold_1858_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2938..3696)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GDJ2_BACFG
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EXZ03070.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
L3_079_000G1_scaffold_1858_6
Prevotella dentalis, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3702..4739)
DNA (1038bp) protein (346aa)
3-oxoacyl-(Acyl-carrier-protein) synthase III {ECO:0000313|EMBL:AGB29470.1}; Beta-ketoacyl-acyl-carrier-protein synthase III {ECO:0000313|EMBL:EGQ12499.1}; EC=2.3.1.180 {ECO:0000313|EMBL:EGQ12499.1};; TaxID=908937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC; 12043 / ES 2772) (Mitsuokella dentalis).;"
3-oxoacyl-(Acyl-carrier-protein) synthase III n=1 Tax=Prevotella dentalis (strain ATCC 49559 / DSM 3688 / JCM 13448 / NCTC 12043 / ES 2772) RepID=F9D6A4_PREDD
3-oxoacyl-(acyl-carrier-protein) synthase III
L3_079_000G1_scaffold_1858_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4762..4992)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XF85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU49532.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
putative acyl carrier protein
L3_079_000G1_scaffold_1858_8
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5027..5671)
DNA (645bp) protein (215aa)
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9EUY0_9BACE
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase {ECO:0000313|EMBL:EIY24239.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
L3_079_000G1_scaffold_1858_9
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5683..6267)
DNA (585bp) protein (195aa)
Bacterial sugar transferase n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VBN7_9BACE
Bacterial sugar transferase {ECO:0000313|EMBL:EFV25767.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative UDP-galactose phosphate transferase
L3_079_000G1_scaffold_1858_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6463..7596)
DNA (1134bp) protein (378aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EFA19705.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFA19705.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
glycosyltransferase, group 1 family protein (EC:2.4.-.-)
Glycosyltransferase, group 1 family protein n=1 Tax=Bacteroides sp. D20 RepID=D2F0N7_9BACE
L3_079_000G1_scaffold_1858_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7739..8575)
DNA (837bp) protein (279aa)
Glycosyl transferase family 2 n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VBN5_9BACE
Glycosyl transferase family 2 {ECO:0000313|EMBL:EFV25765.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_079_000G1_scaffold_1858_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9000..10214)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I8E6_9BACE
O-antigen ligase like membrane family protein {ECO:0000313|EMBL:KDS74595.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_079_000G1_scaffold_1858_13
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10219..11151)
DNA (933bp) protein (311aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PUQ2_9BACE
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EGF55995.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
glycosyl transferase 2
L3_079_000G1_scaffold_1858_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11151..12464)
DNA (1314bp) protein (438aa)
Nucleotide sugar dehydrogenase n=2 Tax=Bacteroides uniformis RepID=I9J5L6_BACUN
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EIY82323.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
UDP-glucose 6-dehydrogenase
L3_079_000G1_scaffold_1858_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12509..14050)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A1W2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82322.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_000G1_scaffold_1858_16
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14154..14645)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VCW1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV25310.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_079_000G1_scaffold_1858_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14691..15224)
DNA (534bp) protein (178aa)
Transcription termination/antitermination factor NusG n=1 Tax=Bacteroides sp. D20 RepID=D2F0M5_9BACE
Transcription termination factor nusG family protein {ECO:0000313|EMBL:KDS50427.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
NGN domain-containing protein
L3_079_000G1_scaffold_1858_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16318..16440)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V9T9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS50430.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
L3_079_000G1_scaffold_1858_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16487..16951
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V9U0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82319.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_000G1_scaffold_1858_20
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17031..17696
DNA (666bp) protein (222aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EGN9_9BACE
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:CDE01845.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
alanine racemase
L3_079_000G1_scaffold_1858_21
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17715..18692
DNA (978bp) protein (326aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EFA19688.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EFA19688.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
Dihydroorotate dehydrogenase 2 n=1 Tax=Bacteroides sp. D20 RepID=D2F0M0_9BACE
dihydroorotate oxidase
L3_079_000G1_scaffold_1858_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18785..20689)
DNA (1905bp) protein (635aa)
Polysaccharide biosynthesis protein n=3 Tax=Bacteroides RepID=A7V9U3_BACUN
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KDS50434.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
polysaccharide biosynthesis protein CapD
L3_079_000G1_scaffold_1858_23
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20875..22200)
DNA (1326bp) protein (442aa)
PhoH family protein n=5 Tax=Bacteroides RepID=D2F0L8_9BACE
PhoH-like protein {ECO:0000313|EMBL:EFV25316.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
PhoH family protein
L3_079_000G1_scaffold_1858_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22369..23631
DNA (1263bp) protein (421aa)
FolC bifunctional protein (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V9U6_BACUN
Bifunctional protein FolC {ECO:0000313|EMBL:EDO51823.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
L3_079_000G1_scaffold_1858_25
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23490..23909)
DNA (420bp) protein (140aa)
Endoribonuclease L-PSP n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VCW9_9BACE
Endoribonuclease L-PSP {ECO:0000313|EMBL:EFV25318.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
endoribonuclease L-PSP
L3_079_000G1_scaffold_1858_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24136..25839)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP04_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05737.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L3_079_000G1_scaffold_1858_27
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26078..26506)
DNA (429bp) protein (143aa)
RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteroides RepID=A7V9V0_BACUN
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EFA19682.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RNA methyltransferase, TrmH family, group 3
L3_079_000G1_scaffold_1858_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26535..28205)
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=2 Tax=Bacteroides RepID=A7V9V1_BACUN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
DNA replication and repair protein RecN
L3_079_000G1_scaffold_1858_29
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28232..29461)
DNA (1230bp) protein (410aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EFA19680.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EFA19680.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EFA19680.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=3 Tax=Bacteroides RepID=D2F0L2_9BACE
L3_079_000G1_scaffold_1858_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29462..30232)
DNA (771bp) protein (257aa)
Exonuclease n=7 Tax=Bacteroides RepID=A7V9V3_BACUN
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOS05733.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Exonuclease RNase T and DNA polymerase III
Displaying items 1-30 of 58 in total

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