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L3_079_000G1_scaffold_1878

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1878_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..1262)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9FSW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS56824.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000G1_scaffold_1878_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1328..1882)
DNA (555bp) protein (185aa)
Transcriptional regulator, AraC family n=3 Tax=Bacteroides RepID=C3Q3R2_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV69371.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000G1_scaffold_1878_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2437..2682)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZWS6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79980.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000G1_scaffold_1878_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2863..3513)
DNA (651bp) protein (217aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C6YZ83_9BACE
Bacterial sensory transduction regulator family protein {ECO:0000313|EMBL:KDS33132.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
membrane protein
L3_079_000G1_scaffold_1878_5
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3618..4928)
DNA (1311bp) protein (437aa)
Gram-positive signal peptide protein, YSIRK family n=3 Tax=Bacteroides RepID=C6YZ84_9BACE
Cephalosporin-C deacetylase {ECO:0000313|EMBL:CDF17205.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
cephalosporin-C deacetylase
L3_079_000G1_scaffold_1878_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4949..5653)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEM8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS33130.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_079_000G1_scaffold_1878_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5760..6491
DNA (732bp) protein (244aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6YZ86_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET13954.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_079_000G1_scaffold_1878_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6689..7168)
DNA (480bp) protein (160aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L015_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39029.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000G1_scaffold_1878_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7158..7667)
DNA (510bp) protein (170aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HEY3_BACVU
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS02474.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
RNA polymerase sigma70 factor
L3_079_000G1_scaffold_1878_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7731..8504)
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Acetylglutamate kinase n=5 Tax=Bacteroides RepID=C6YZ89_9BACE
acetylglutamate kinase
L3_079_000G1_scaffold_1878_11
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8509..10401)
DNA (1893bp) protein (631aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase n=14 Tax=Bacteroides RepID=SPEA_BACV8
L3_079_000G1_scaffold_1878_12
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10443..10970)
DNA (528bp) protein (176aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Shikimate kinase n=7 Tax=Bacteroides RepID=AROK_BACV8
shikimate kinase
L3_079_000G1_scaffold_1878_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10967..13405)
DNA (2439bp) protein (813aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
DNA topoisomerase 1 n=5 Tax=Bacteroides RepID=A6L010_BACV8
DNA topoisomerase I
L3_079_000G1_scaffold_1878_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13527..15224)
DNA (1698bp) protein (566aa)
Outer membrane insertion signal domain protein n=2 Tax=Bacteroides vulgatus RepID=D4V3M7_BACVU
Putative TonB-dependent receptor {ECO:0000313|EMBL:ABR39023.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
TonB-dependent receptor
L3_079_000G1_scaffold_1878_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15248..18130)
DNA (2883bp) protein (961aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7NWV5_9BACE
Putative tol-pal system protein YbgF {ECO:0000313|EMBL:EFG19569.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_000G1_scaffold_1878_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18161..18685)
DNA (525bp) protein (175aa)
Hydrolase, NUDIX family n=5 Tax=Bacteroides RepID=C6YZ95_9BACE
MutT family protein {ECO:0000313|EMBL:EFV69385.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
mutT family protein
L3_079_000G1_scaffold_1878_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18887..19879
DNA (993bp) protein (331aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L006_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79994.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_1878_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19902..20285
DNA (384bp) protein (128aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=A6L005_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS33117.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000G1_scaffold_1878_19
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20402..20860
DNA (459bp) protein (153aa)
Transcriptional regulator n=16 Tax=Bacteroides RepID=A6L004_BACV8
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDF17191.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000G1_scaffold_1878_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20867..21181
DNA (315bp) protein (105aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=C3Q3P4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79997.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000G1_scaffold_1878_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21791..23602)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UCZ0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79998.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000G1_scaffold_1878_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23794..25155
DNA (1362bp) protein (454aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9J135_BACVU
putative two-component regulatory system, sensor kinase protein
L3_079_000G1_scaffold_1878_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25204..25872
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZWU3_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80000.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
putative two-component system, response regulator protein
L3_079_000G1_scaffold_1878_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25923..27134
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UC69_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY80001.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
TonB-dependent receptor
L3_079_000G1_scaffold_1878_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27362..27871
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UC69_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS56788.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
TonB-dependent receptor
Displaying 25 items

View Taxonomy