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L3_079_000G1_scaffold_795

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_795_1
unknown

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comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

L3_079_000G1_scaffold_795_2
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(325..609)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WBI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ93141.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Protein of unknown function (DUF2442).
L3_079_000G1_scaffold_795_3
Coprococcus sp. ART55/1, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(629..889)
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LA19_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK82169.1}; TaxID=751585 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. ART55/1.;"
L3_079_000G1_scaffold_795_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1025..1477)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VUC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60572.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_079_000G1_scaffold_795_5
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1474..1782)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DD42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD88156.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_079_000G1_scaffold_795_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1866..2027)
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AY92_9FIRM
Putative phage protein {ECO:0000313|EMBL:CCL00274.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
conserved hypothetical protein
L3_079_000G1_scaffold_795_7
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2165..2644)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Dorea RepID=G1WM59_9FIRM
conserved hypothetical protein TIGR00246
L3_079_000G1_scaffold_795_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2654..3403)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QL54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22697.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
zinc/iron permease
L3_079_000G1_scaffold_795_9
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(3425..3979)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XRG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15094.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
hypothetical protein
L3_079_000G1_scaffold_795_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4002..4631)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAX9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08287.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_079_000G1_scaffold_795_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4696..6084)
DNA (1389bp) protein (463aa)
glutamate synthase (NADPH), homotetrameric (EC:1.4.1.13 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=2 Tax=Clostridiales RepID=B0NAY1_CLOSV
Glutamate synthase, homotetrameric {ECO:0000313|EMBL:EGN30331.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_079_000G1_scaffold_795_12
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6084..6971)
DNA (888bp) protein (296aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.97.-.- 1.18.1.2)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30332.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L3_079_000G1_scaffold_795_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7149..8399)
DNA (1251bp) protein (417aa)
Tetratricopeptide repeat protein n=2 Tax=Clostridiales RepID=B0NAY3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30333.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Tetratricopeptide repeat.
L3_079_000G1_scaffold_795_14
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8446..10833)
DNA (2388bp) protein (796aa)
FtsK/SpoIIIE family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAY5_CLOSV
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EDS08293.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
DNA translocase FtsK
L3_079_000G1_scaffold_795_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10900..11589)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9ME77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69001.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Protease subunit of ATP-dependent Clp proteases
L3_079_000G1_scaffold_795_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11637..12917)
DNA (1281bp) protein (427aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WP03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD08569.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_079_000G1_scaffold_795_17
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12963..13427)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAY8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS08296.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_079_000G1_scaffold_795_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13434..14165)
DNA (732bp) protein (244aa)
Probable transcriptional regulatory protein CLOSCI_00608 n=2 Tax=Clostridiales RepID=B0NAY9_CLOSV
Probable transcriptional regulatory protein HMPREF0993_01248 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
conserved hypothetical protein TIGR01033
L3_079_000G1_scaffold_795_19
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14217..15014)
DNA (798bp) protein (266aa)
CBS domain protein n=2 Tax=Clostridiales RepID=B0NAZ0_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30340.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_079_000G1_scaffold_795_20
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15037..15384)
DNA (348bp) protein (116aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
mRNA interferase n=2 Tax=Clostridiales RepID=B0NAZ1_CLOSV
Growth inhibitor
L3_079_000G1_scaffold_795_21
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15468..16631)
DNA (1164bp) protein (388aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BVY8_9CLOT
L3_079_000G1_scaffold_795_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16662..18173)
DNA (1512bp) protein (504aa)
YjeF domain protein n=2 Tax=Clostridiales RepID=B0NAZ3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30343.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region
L3_079_000G1_scaffold_795_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18296..18937)
DNA (642bp) protein (214aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Dorea sp. CAG:317 RepID=R6WX41_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
redox-sensing transcriptional repressor Rex
L3_079_000G1_scaffold_795_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19062..20984
DNA (1923bp) protein (641aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NAZ5_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS08303.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_079_000G1_scaffold_795_25
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21045..22241)
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Dorea sp. 5-2 RepID=R9NEE0_9FIRM
L3_079_000G1_scaffold_795_26
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22192..22899)
DNA (708bp) protein (236aa)
FCD domain protein n=2 Tax=Clostridiales RepID=B0NB02_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN30351.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
transcriptional regulator, GntR family
L3_079_000G1_scaffold_795_27
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22904..24301)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NNT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81682.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Isopropylmalate/homocitrate/citramalate synthases
L3_079_000G1_scaffold_795_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24424..25638)
DNA (1215bp) protein (405aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EDS08316.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EDS08316.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine ammonia-lyase n=2 Tax=Clostridiales RepID=B0NB08_CLOSV
L3_079_000G1_scaffold_795_29
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25642..26577)
DNA (936bp) protein (312aa)
Signal recognition particle receptor FtsY n=1 Tax=Dorea sp. CAG:317 RepID=R6XQK7_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
signal recognition particle-docking protein FtsY
L3_079_000G1_scaffold_795_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26592..30152)
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NB10_CLOSV
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
condensin subunit Smc
Displaying items 1-30 of 40 in total

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