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L3_079_000G1_scaffold_722

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_722_1
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..7208)
DNA (7206bp) protein (2402aa)
wapA1; tRNA(Glu)-specific nuclease WapA (EC:3.1.-.-)
Pretoxin HINT domain protein n=1 Tax=Clostridium sp. CAG:389 RepID=R7LQH0_9CLOT
Pretoxin HINT domain protein {ECO:0000313|EMBL:CDE90341.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
L3_079_000G1_scaffold_722_2
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7387..8025)
DNA (639bp) protein (213aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
sipA; signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7Y9_9CLOT
L3_079_000G1_scaffold_722_3
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8051..9289)
DNA (1239bp) protein (413aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
dapL; diaminopimelate aminotransferase DapL (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5Q9_9CLOT
L3_079_000G1_scaffold_722_4
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9292..10122)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:470 RepID=R7FJ70_9CLOT
L3_079_000G1_scaffold_722_5
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10281..11546)
DNA (1266bp) protein (422aa)
Bifunctional protein FolC n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4S5_9CLOT
Bifunctional protein FolC {ECO:0000313|EMBL:CDE09840.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
bifunctional protein FolC
L3_079_000G1_scaffold_722_6
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11648..12478)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5C5_9CLOT
L3_079_000G1_scaffold_722_7
Clostridium sp. CAG:302, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12840..13346)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:302 RepID=R6M8Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB92399.1}; TaxID=1262793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:302.;"
L3_079_000G1_scaffold_722_8
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14107..14385)
DNA (279bp) protein (93aa)
Histone family protein DNA-binding protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7Z3_9CLOT
Histone family protein DNA-binding protein {ECO:0000313|EMBL:CDE09842.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
bacterial nucleoid DNA-binding protein
L3_079_000G1_scaffold_722_9
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14562..16190)
DNA (1629bp) protein (543aa)
Stage V sporulation protein B n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5R4_9CLOT
Stage V sporulation protein B {ECO:0000313|EMBL:CDE09843.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
stage V sporulation protein B
L3_079_000G1_scaffold_722_10
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16333..18702
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09844.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
type IV secretory pathway, VirD4 component
L3_079_000G1_scaffold_722_11
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18785..19726)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4S8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09845.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_722_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19739..20224)
DNA (486bp) protein (162aa)
S1 RNA binding domain protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5C9_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:CDE09846.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
RNA binding S1 domain-containing protein
L3_079_000G1_scaffold_722_13
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20292..21062)
DNA (771bp) protein (257aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
rluB; ribosomal large subunit pseudouridine synthase B (EC:5.4.99.22)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7Z9_9CLOT
L3_079_000G1_scaffold_722_14
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21216..22142)
DNA (927bp) protein (309aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5R8_9CLOT
RluA family pseudouridine synthase
L3_079_000G1_scaffold_722_15
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22129..22701)
DNA (573bp) protein (191aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3I7_9CLOT
lipoprotein signal peptidase
L3_079_000G1_scaffold_722_16
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22712..24364)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09850.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_000G1_scaffold_722_17
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24491..25153)
DNA (663bp) protein (221aa)
Single-strand binding protein/Primosomal replication protein n n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5D2_9CLOT
Single-strand binding protein/Primosomal replication protein n {ECO:0000313|EMBL:CDE09851.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
ssb1; single-strand DNA-binding protein Ssb
L3_079_000G1_scaffold_722_18
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25296..25463)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F804_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09852.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_722_19
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25600..26025
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09853.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_722_20
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26108..26245)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09854.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_722_21
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26271..26609)
DNA (339bp) protein (113aa)
Putative permease n=1 Tax=Clostridium sp. CAG:354 RepID=R7F4T6_9CLOT
Putative permease {ECO:0000313|EMBL:CDE09855.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
putative permease
L3_079_000G1_scaffold_722_22
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26671..27015)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE09856.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
putative permease
L3_079_000G1_scaffold_722_23
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27044..28285)
DNA (1242bp) protein (414aa)
AAA ATPase n=1 Tax=Clostridium sp. CAG:354 RepID=R7F5S6_9CLOT
AAA ATPase {ECO:0000313|EMBL:CDE09858.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
AAA ATPase
L3_079_000G1_scaffold_722_24
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28296..28895)
DNA (600bp) protein (200aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3J6_9CLOT
Holliday junction DNA helicase subunit RuvA
L3_079_000G1_scaffold_722_25
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29011..29478
DNA (468bp) protein (156aa)
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C n=1 Tax=Clostridium sp. CAG:354 RepID=R7F3K0_9CLOT
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C {ECO:0000313|EMBL:CDE09864.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
L3_079_000G1_scaffold_722_26
Clostridium sp. CAG:798, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29515..31137)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:798 RepID=R6YBB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD15772.1}; TaxID=1262841 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:798.;"
recombinase
L3_079_000G1_scaffold_722_27
Clostridium sp. CAG:921, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31583..31726)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:921 RepID=R5KW31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY71023.1}; TaxID=1262847 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:921.;"
L3_079_000G1_scaffold_722_28
Clostridium sp. CAG:356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32256..32933)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R6YTS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD37295.1}; TaxID=1262800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:356.;"
L3_079_000G1_scaffold_722_29
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32970..34451)
DNA (1482bp) protein (494aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:470 RepID=R7FIU3_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDE15229.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
ECF subfamily RNA polymerase sigma-24 factor
L3_079_000G1_scaffold_722_30
Clostridium sp. CAG:389, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34605..34820)
DNA (216bp) protein (72aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:389 RepID=R7LR60_9CLOT
RNA polymerase sigma factor {ECO:0000313|EMBL:CDE90223.1}; TaxID=1262801 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:389.;"
Displaying items 1-30 of 43 in total

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