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L3_079_000G1_scaffold_1833

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1833_1
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3003..3518)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10347.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_000G1_scaffold_1833_2
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3531..4388)
DNA (858bp) protein (286aa)
ParB-like protein partition protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F791_9CLOT
ParB-like protein partition protein {ECO:0000313|EMBL:CDE10348.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
parB-like protein partition protein
L3_079_000G1_scaffold_1833_3
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4416..5288)
DNA (873bp) protein (291aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium sp. CAG:354 RepID=R7F514_9CLOT
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:CDE10349.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
chromosome partitioning ATPase
L3_079_000G1_scaffold_1833_4
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5381..6103)
DNA (723bp) protein (241aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium sp. CAG:354 RepID=R7F672_9CLOT
methyltransferase GidB
L3_079_000G1_scaffold_1833_5
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6105..7991)
DNA (1887bp) protein (629aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6U9_9CLOT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
glucose inhibited division protein A
L3_079_000G1_scaffold_1833_6
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8214..9584)
DNA (1371bp) protein (457aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
tRNA modification GTPase MnmE n=1 Tax=Clostridium sp. CAG:354 RepID=R7F9G3_9CLOT
tRNA modification GTPase trmE
L3_079_000G1_scaffold_1833_7
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10156..10827)
DNA (672bp) protein (224aa)
Single-stranded nucleic acid binding R3H domain-containing protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAS5_9CLOT
Single-stranded nucleic acid binding R3H domain-containing protein {ECO:0000313|EMBL:CDE10827.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
jag; SpoIIIJ-associated protein
L3_079_000G1_scaffold_1833_8
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10817..11701)
DNA (885bp) protein (295aa)
Membrane protein insertase YidC/Oxa1 family n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8M7_9CLOT
Membrane protein insertase YidC/Oxa1 family {ECO:0000313|EMBL:CDE10828.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
YidC/Oxa1 family membrane protein insertase
L3_079_000G1_scaffold_1833_9
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11715..11933)
DNA (219bp) protein (73aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6E1_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_000G1_scaffold_1833_10
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11933..12286)
DNA (354bp) protein (118aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
Ribonuclease P protein component n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7K4_9CLOT
ribonuclease P protein component
L3_079_000G1_scaffold_1833_11
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12352..12486)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Clostridium sp. CAG:354 RepID=R7F876_9CLOT
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
rpmH; 50S ribosomal protein L34
L3_079_000G1_scaffold_1833_12
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13060..14403
DNA (1344bp) protein (448aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAS7_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
chromosomal replication initiator protein DnaA
L3_079_000G1_scaffold_1833_13
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14734..15849
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8N1_9CLOT
DNA polymerase III subunit beta
L3_079_000G1_scaffold_1833_14
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15979..17058
DNA (1080bp) protein (360aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6E5_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
recF; DNA replication and repair protein RecF
L3_079_000G1_scaffold_1833_15
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17075..17368
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7K9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10835.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_1833_16
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17355..19286
DNA (1932bp) protein (644aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium sp. CAG:354 RepID=R7F880_9CLOT
L3_079_000G1_scaffold_1833_17
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19470..19997
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10837.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_1833_18
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19984..21405
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10838.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_000G1_scaffold_1833_19
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21419..21805
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F8N5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10838.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
hypothetical protein
L3_079_000G1_scaffold_1833_20
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21876..22391
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F6E9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10839.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_1833_21
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22396..23109
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:354 RepID=R7F7L2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE10840.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
L3_079_000G1_scaffold_1833_22
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23242..25680
DNA (2439bp) protein (813aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium sp. CAG:354 RepID=R7F884_9CLOT
L3_079_000G1_scaffold_1833_23
Clostridium sp. CAG:354, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25805..27286
DNA (1482bp) protein (494aa)
Alpha amylase catalytic region n=1 Tax=Clostridium sp. CAG:354 RepID=R7FAT6_9CLOT
Alpha amylase catalytic region {ECO:0000313|EMBL:CDE10842.1}; TaxID=1262799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:354.;"
alpha amylase
L3_079_000G1_scaffold_1833_24
unknown

Not on your lists

27289..28272
DNA (984bp) protein (328aa)

This feature has no annotations

L3_079_000G1_scaffold_1833_25
Clostridium sp. CAG:470, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28529..29275)
DNA (747bp) protein (249aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:470 RepID=R7FF89_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDE13984.1}; TaxID=1262812 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:470.;"
methyltransferase
Displaying 25 items

View Taxonomy