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L3_079_000G1_scaffold_309

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_309_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1569)
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76694.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
N-acetylmuramidase/lysin
L3_079_000G1_scaffold_309_2
unknown

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1705..2274
DNA (570bp) protein (190aa)

This feature has no annotations

L3_079_000G1_scaffold_309_3
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2763..4196)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GWJ1_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:KJW99069.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
polysaccharide pyruvyl transferase
L3_079_000G1_scaffold_309_4
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4421..6100
DNA (1680bp) protein (560aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YL40_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EPD58207.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
nucleoside-diphosphate-sugar epimerase family protein
L3_079_000G1_scaffold_309_5
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6114..8000
DNA (1887bp) protein (629aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YL37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58202.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
rhamnan synthesis protein F
L3_079_000G1_scaffold_309_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8037..8762
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ANN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45887.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
lipopolysaccharide transport system ATP-binding protein
L3_079_000G1_scaffold_309_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8753..9547
DNA (795bp) protein (265aa)
O-antigen export system permease protein RfbA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4C9_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_079_000G1_scaffold_309_8
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9547..11133
DNA (1587bp) protein (529aa)
GDSL-like protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7R077_9FIRM
GDSL-like protein {ECO:0000313|EMBL:CDF43318.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
L3_079_000G1_scaffold_309_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11154..12122
DNA (969bp) protein (323aa)
Glycosyltransferase group 2 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBG8_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCZ23654.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Glycosyltransferase
L3_079_000G1_scaffold_309_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12207..14669
DNA (2463bp) protein (821aa)
Glycosyltransferase, group 1 family protein n=6 Tax=Erysipelotrichaceae RepID=B0N1V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36856.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
putative glycosyltransferase
L3_079_000G1_scaffold_309_11
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14669..15145
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R3U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36855.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycosyltransferase
L3_079_000G1_scaffold_309_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15246..15932
DNA (687bp) protein (229aa)
Uncharacterized protein n=4 Tax=Coprobacillus RepID=C3RIP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36853.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_079_000G1_scaffold_309_13
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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15988..17409
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2EBED
Uncharacterized protein {ECO:0000313|EMBL:EOS25840.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_079_000G1_scaffold_309_14
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17458..18987
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z2F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58209.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_079_000G1_scaffold_309_15
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19003..20034
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GGJ8_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO38803.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_079_000G1_scaffold_309_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20016..21611
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23660.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_309_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21644..22009
DNA (366bp) protein (122aa)
Putative cell wall teichoic acid glycosylation protein GtcA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRN4_9FIRM
Putative cell wall teichoic acid glycosylation protein GtcA {ECO:0000313|EMBL:CCZ23647.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
gtrA-like family protein
L3_079_000G1_scaffold_309_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22011..22943
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q560_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23648.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
glycosyl transferase 2
L3_079_000G1_scaffold_309_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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23277..23879
DNA (603bp) protein (201aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBH5_9FIRM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CCZ23664.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Sua5/YciO/YrdC/YwlC family protein
L3_079_000G1_scaffold_309_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23876..24316
DNA (441bp) protein (147aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4F1_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CCZ23665.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_309_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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24323..25561
DNA (1239bp) protein (413aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Serine hydroxymethyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNA1_9FIRM
glyA; glycine hydroxymethyltransferase
L3_079_000G1_scaffold_309_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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25572..26198
DNA (627bp) protein (209aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRP7_9FIRM
L3_079_000G1_scaffold_309_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26164..26394
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q575_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23668.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_309_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26391..26756
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23669.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_309_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26753..27421
DNA (669bp) protein (223aa)
ATP synthase subunit a n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4F6_9FIRM
ATP synthase subunit a {ECO:0000256|RuleBase:RU000483}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ATP synthase F0 subunit A
L3_079_000G1_scaffold_309_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27489..27713
DNA (225bp) protein (75aa)
atpE; ATP synthase c chain (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QNA5_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_309_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27745..28245
DNA (501bp) protein (167aa)
ATP synthase subunit b n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRP9_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
atpF; F0F1 ATP synthase subunit B
L3_079_000G1_scaffold_309_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28245..28778
DNA (534bp) protein (178aa)
ATP synthase subunit delta n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q580_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
atpH; ATP synthase subunit delta
L3_079_000G1_scaffold_309_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28788..30311
DNA (1524bp) protein (508aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ATP synthase F1 subcomplex alpha subunit (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QBI5_9FIRM
L3_079_000G1_scaffold_309_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30311..31165
DNA (855bp) protein (285aa)
ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4G1_9FIRM
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying items 1-30 of 75 in total

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