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L3_079_000G1_scaffold_1066

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1066_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(211..1554)
DNA (1344bp) protein (448aa)
Magnesium transporter n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7L6_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
magnesium transporter
L3_079_000G1_scaffold_1066_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1796..2746)
DNA (951bp) protein (317aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDZ2_9FIRM
L3_079_000G1_scaffold_1066_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2785..4116)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q715_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Mg2+ transporter (mgtE)
L3_079_000G1_scaffold_1066_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4416..5555)
DNA (1140bp) protein (380aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU55_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ24507.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5609..5812)
DNA (204bp) protein (68aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7M0_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ24508.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
gerE; DNA-binding HTH domain-containing protein
L3_079_000G1_scaffold_1066_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5849..7624)
DNA (1776bp) protein (592aa)
UvrABC system protein C n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDZ6_9FIRM
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
uvrC; excinuclease ABC subunit C
L3_079_000G1_scaffold_1066_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7624..9927)
DNA (2304bp) protein (768aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Endonuclease MutS2 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q717_9FIRM
recombination and DNA strand exchange inhibitor protein
L3_079_000G1_scaffold_1066_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9930..10679)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24511.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10787..11545
DNA (759bp) protein (253aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Ribonuclease n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU60_9FIRM
rnh; ribonuclease HIII
L3_079_000G1_scaffold_1066_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11571..12038)
DNA (468bp) protein (156aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7M5_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:CCZ24513.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1066_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12040..12945)
DNA (906bp) protein (302aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Pseudouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDZ9_9FIRM
large ribosomal pseudouridine synthesis protein
L3_079_000G1_scaffold_1066_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12920..13420)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Lipoprotein signal peptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q722_9FIRM
lipoprotein signal peptidase
L3_079_000G1_scaffold_1066_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13562..14101
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24516.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1066_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14191..15078
DNA (888bp) protein (296aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU64_9FIRM
L3_079_000G1_scaffold_1066_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15059..15706
DNA (648bp) protein (216aa)
Vitamin B12 dependent methionine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7M7_9FIRM
Vitamin B12 dependent methionine synthase {ECO:0000313|EMBL:CCZ24518.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Vitamin B12 dependent methionine synthase, activation domain.
L3_079_000G1_scaffold_1066_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15688..18036
DNA (2349bp) protein (783aa)
B12 binding domain./Pterin binding enzyme./Homocysteine S-methyltransferase. (EC:2.1.1.13)
Homocysteine S-methyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QE01_9FIRM
Homocysteine S-methyltransferase {ECO:0000313|EMBL:CCZ24519.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18048..18617)
DNA (570bp) protein (190aa)
Exonuclease DNA polymerase III epsilon subunit family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q728_9FIRM
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CCZ24520.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
polC; DNA polymerase III subunit epsilon
L3_079_000G1_scaffold_1066_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18619..20031)
DNA (1413bp) protein (471aa)
pepD; Xaa-His dipeptidase family protein (EC:3.4.13.20)
Aminoacyl-histidine dipeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQR7_9FIRM
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:CCZ24521.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20041..21369)
DNA (1329bp) protein (443aa)
MATE efflux family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU67_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ24522.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative efflux protein, MATE family
L3_079_000G1_scaffold_1066_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21444..21728)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24523.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21725..22525)
DNA (801bp) protein (267aa)
HAD-superfamily hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QE05_9FIRM
HAD-superfamily hydrolase {ECO:0000313|EMBL:CCZ24524.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cof family hydrolase
L3_079_000G1_scaffold_1066_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22518..23891)
DNA (1374bp) protein (458aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q731_9FIRM
UDP-N-acetylmuramyl tripeptide synthase
L3_079_000G1_scaffold_1066_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23902..24816)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24526.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1066_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24818..25060)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24527.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1066_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25103..25996)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24536.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1066_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26054..27835)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QU79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24537.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_079_000G1_scaffold_1066_27
Firmicutes bacterium CAG:321, Firmicutes, Bacteria

Not on your lists

comp(27853..29622)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:321 RepID=R7HIJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE39215.1}; TaxID=1263018 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:321.;"
L3_079_000G1_scaffold_1066_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29710..31290)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q752_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24550.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1066_29
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(31547..32734)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RQH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM91312.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
tnr5; putative transposon integrase
L3_079_000G1_scaffold_1066_30
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32813..33013)
DNA (201bp) protein (67aa)
Excisionase transposon n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXC5_9FIRM
Excisionase transposon {ECO:0000313|EMBL:EGX77800.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
Displaying 30 items

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