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L3_079_000G1_scaffold_1121

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1121_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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46..1206
DNA (1161bp) protein (387aa)
Peptide chain release factor 1 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT8_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
prfA; Peptide chain release factor 1
L3_079_000G1_scaffold_1121_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1206..2063
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
prmC_1; Release factor glutamine methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H8_9FIRM
L3_079_000G1_scaffold_1121_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2060..2557
DNA (498bp) protein (166aa)
Ribosomal-protein-serine acetyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT21_9FIRM
Ribosomal-protein-serine acetyltransferase {ECO:0000313|EMBL:CCZ24137.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
acetyltransferase family protein
L3_079_000G1_scaffold_1121_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3022..5205
DNA (2184bp) protein (728aa)
Stage II sporulation protein E n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPJ6_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:CCZ24136.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
stage II sporulation protein E
L3_079_000G1_scaffold_1121_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5205..6473
DNA (1269bp) protein (423aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V8_9FIRM
L3_079_000G1_scaffold_1121_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6484..7017
DNA (534bp) protein (178aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT6_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CCZ24134.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1121_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7030..8985
DNA (1956bp) protein (652aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H5_9FIRM
L3_079_000G1_scaffold_1121_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9120..9989
DNA (870bp) protein (290aa)
33 kDa chaperonin n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT18_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
heat shock protein Hsp33
L3_079_000G1_scaffold_1121_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10181..11155
DNA (975bp) protein (325aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
dusC; tRNA-dihydrouridine synthase C (EC:1.-.-.-)
tRNA-dihydrouridine synthase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q5V4_9FIRM
L3_079_000G1_scaffold_1121_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11229..11849)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24129.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11990..14101
DNA (2112bp) protein (704aa)
MMPL family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6H0_9FIRM
MMPL family protein {ECO:0000313|EMBL:CCZ24128.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14103..15674
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QT14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24127.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15852..16232
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QPI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24126.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16348..17016
DNA (669bp) protein (223aa)
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QCP7_9FIRM
4-methyl-5(Beta-hydroxyethyl)-thiazole monophosphate synthesis protein {ECO:0000313|EMBL:CCZ24079.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
putative intracellular protease/amidase
L3_079_000G1_scaffold_1121_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17065..17550
DNA (486bp) protein (162aa)
Hydrolase NUDIX family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q713_9FIRM
Hydrolase NUDIX family {ECO:0000313|EMBL:CCZ24363.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
NUDIX family hydrolase
L3_079_000G1_scaffold_1121_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(17558..18118)
DNA (561bp) protein (187aa)
peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6J0_9FIRM
Peroxiredoxin {ECO:0000313|EMBL:CCZ24365.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1121_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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18368..19198
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QQ84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24366.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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19303..20721
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24367.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
FAD dependent oxidoreductase family protein
L3_079_000G1_scaffold_1121_19
Firmicutes bacterium M10-2, Firmicutes, Bacteria

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comp(20747..21658)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LLA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS59343.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
sugar kinase
L3_079_000G1_scaffold_1121_20
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21659..23059)
DNA (1401bp) protein (467aa)
bglC; Aryl-phospho-beta-D-glucosidase BglC (EC:3.2.1.86)
Aryl-phospho-beta-D-glucosidase BglC {ECO:0000313|EMBL:CDM68214.1}; EC=3.2.1.86 {ECO:0000313|EMBL:CDM68214.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Aryl-phospho-beta-D-glucosidase BglC n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LSW0_9CLOT
L3_079_000G1_scaffold_1121_21
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(23069..24310)
DNA (1242bp) protein (414aa)
PTS system lactose/cellobiose family transporter subunit IIC (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIC, putative cellobiose specific n=2 Tax=Lactobacillus pentosus RepID=F6IXS3_LACPE
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1042160 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus pentosus IG1.;"
L3_079_000G1_scaffold_1121_22
Enterococcus avium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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24473..25261
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Enterococcus avium ATCC 14025 RepID=S0RSG7_ENTAV
Uncharacterized protein {ECO:0000313|EMBL:EOT40688.1}; TaxID=1140002 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus avium ATCC 14025.;"
hypothetical protein
L3_079_000G1_scaffold_1121_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(25337..26023)
DNA (687bp) protein (229aa)
Transcriptional regulator n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q720_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ24368.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
transcriptional regulator
L3_079_000G1_scaffold_1121_24
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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26076..26687
DNA (612bp) protein (204aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19110.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_079_000G1_scaffold_1121_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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26719..27996
DNA (1278bp) protein (426aa)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0T6_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system subunit IIC
L3_079_000G1_scaffold_1121_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28087..28935
DNA (849bp) protein (283aa)
folD; Bifunctional protein FolD, Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase (EC:1.5.1.5)
Bifunctional protein FolD n=3 Tax=Erysipelotrichaceae RepID=B0N1D9_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_079_000G1_scaffold_1121_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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28938..29126
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QTI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24327.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1121_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(29294..30076)
DNA (783bp) protein (261aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QDB1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ24329.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cof family hydrolase
L3_079_000G1_scaffold_1121_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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30198..31631
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q6F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24330.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Displaying 29 items

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