ggKbase home page

L3_079_000G1_scaffold_1425

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000G1_scaffold_1425_1
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1..432)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24671.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(441..2579)
DNA (2139bp) protein (713aa)
Tex-like protein N-terminal domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUI5_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CCZ24672.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Tex protein-related transcription accessory protein (S1 RNA binding domain)
L3_079_000G1_scaffold_1425_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2590..3000)
DNA (411bp) protein (137aa)
Mutator mutT protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Z7_9FIRM
Mutator mutT protein {ECO:0000313|EMBL:CCZ24673.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
DNA mismatch repair protein MutT
L3_079_000G1_scaffold_1425_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3072..4469
DNA (1398bp) protein (466aa)
Putative dipeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEA6_9FIRM
Putative dipeptidase {ECO:0000313|EMBL:CCZ24674.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
diguanylate cyclase
L3_079_000G1_scaffold_1425_5
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4671..5612)
DNA (942bp) protein (314aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7F7_9FIRM
L3_079_000G1_scaffold_1425_6
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5627..6871)
DNA (1245bp) protein (415aa)
Putative dGTPase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR41_9FIRM
Putative dGTPase {ECO:0000313|EMBL:CCZ24676.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_079_000G1_scaffold_1425_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6961..7872)
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUI9_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsX; cell division protein
L3_079_000G1_scaffold_1425_8
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7872..8555)
DNA (684bp) protein (228aa)
Cell division ATP-binding protein FtsE n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7Z9_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CCZ24678.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsE; cell division ATP-binding protein FtsE
L3_079_000G1_scaffold_1425_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8668..9105
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24679.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9117..9980)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24680.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1425_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9973..11088)
DNA (1116bp) protein (372aa)
Peptide chain release factor 2 n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR46_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1425_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11088..13721)
DNA (2634bp) protein (878aa)
Protein translocase subunit SecA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUJ3_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
secA1; Protein translocase subunit SecA 1
L3_079_000G1_scaffold_1425_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13832..14035)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q804_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24683.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cold-shock DNA-binding domain-containing protein
L3_079_000G1_scaffold_1425_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14299..14928)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24684.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14877..15992)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7G5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24685.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
L3_079_000G1_scaffold_1425_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16098..16832)
DNA (735bp) protein (245aa)
Two component transcriptional regulator LytTR family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR51_9FIRM
Two component transcriptional regulator LytTR family {ECO:0000313|EMBL:CCZ24686.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
lytT; response regulator
L3_079_000G1_scaffold_1425_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16855..17337)
DNA (483bp) protein (161aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUJ9_9FIRM
coaD; phosphopantetheine adenylyltransferase
L3_079_000G1_scaffold_1425_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17337..17891)
DNA (555bp) protein (185aa)
RNA methyltransferase RsmD family n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q808_9FIRM
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CCZ24688.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
SAM-dependent methyltransferase
L3_079_000G1_scaffold_1425_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17888..18235)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24689.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18232..18417)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24690.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18411..18701)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24691.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1425_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18734..19957)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24692.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
FtsW/RodA/SpoVE family cell division protein
L3_079_000G1_scaffold_1425_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19957..20217)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q812_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24693.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L3_079_000G1_scaffold_1425_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20340..20528
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QEC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24694.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L3_079_000G1_scaffold_1425_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20581..21150
DNA (570bp) protein (190aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7H3_9FIRM
L3_079_000G1_scaffold_1425_26
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21608..22708)
DNA (1101bp) protein (367aa)
Transposase, IS4 family n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RFU1_9FIRM
Transposase, IS4 family {ECO:0000313|EMBL:EDP10338.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
IS1675 (IS4 family) transposase
L3_079_000G1_scaffold_1425_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22903..24198)
DNA (1296bp) protein (432aa)
Alpha amylase catalytic domain protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR59_9FIRM
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CCZ24696.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Glycosidases
L3_079_000G1_scaffold_1425_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24291..24890
DNA (600bp) protein (200aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QUL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ24697.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Displaying 28 items

View Taxonomy