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L3_079_000M1_scaffold_2084

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_2084_1
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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103..681
DNA (579bp) protein (193aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D607_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDA73282.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase ECF-type sigma factor
L3_079_000M1_scaffold_2084_2
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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778..1779
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CF19_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS33185.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
anti-sigma factor
L3_079_000M1_scaffold_2084_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1889..5323
DNA (3435bp) protein (1145aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1FEP2_BACFG
Membrane protein {ECO:0000313|EMBL:KER53770.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
hypothetical protein
L3_079_000M1_scaffold_2084_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5334..7115
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis HMW 610 RepID=K1GLV4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EKA90397.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;"
hypothetical protein
L3_079_000M1_scaffold_2084_5
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7153..8100
DNA (948bp) protein (316aa)
Type I phosphodiesterase / nucleotide pyrophosphatase superfamily n=2 Tax=Bacteroides RepID=R6S871_9BACE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EEF76810.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
hypothetical protein
L3_079_000M1_scaffold_2084_6
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8931..9428)
DNA (498bp) protein (166aa)
Hemolysin secretion protein n=2 Tax=Bacteroides RepID=R7NTH7_9BACE
Hemolysin secretion protein {ECO:0000313|EMBL:CDF15986.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L3_079_000M1_scaffold_2084_7
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9444..11636)
DNA (2193bp) protein (731aa)
Xenobiotic-transporting ATPase (EC:3.6.3.44)
Uncharacterized protein n=2 Tax=Bacteroides massiliensis RepID=U6R8W0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA52402.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
L3_079_000M1_scaffold_2084_8
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11646..13937)
DNA (2292bp) protein (764aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NRC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF15984.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L3_079_000M1_scaffold_2084_9
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13941..14333)
DNA (393bp) protein (131aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NV70_9BACE
Radical SAM additional 4Fe4S-binding domain-containing protein {ECO:0000313|EMBL:CDF15983.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
radical SAM protein
L3_079_000M1_scaffold_2084_10
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14357..14578)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NV17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF15982.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
L3_079_000M1_scaffold_2084_11
unknown

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comp(14686..14841)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_000M1_scaffold_2084_12
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14974..15501
DNA (528bp) protein (176aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NTD6_9BACE
Displaying 12 items

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