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L3_079_000M1_scaffold_2576

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_2576_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..94
DNA (93bp) protein (31aa)
50S ribosomal protein L7/L12 n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RBY8_9BACE
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
L3_079_000M1_scaffold_2576_2
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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197..4009
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroides RepID=RPOB_BACV8
L3_079_000M1_scaffold_2576_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4048..8334
DNA (4287bp) protein (1429aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=7 Tax=root RepID=RPOC_BACV8
L3_079_000M1_scaffold_2576_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8543..8884
DNA (342bp) protein (114aa)
Uncharacterized protein n=15 Tax=Bacteroides RepID=A6KYK0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS54212.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_2576_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9073..9486
DNA (414bp) protein (138aa)
30S ribosomal protein S12 n=16 Tax=Bacteroides RepID=RS12_BACV8
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000M1_scaffold_2576_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9635..10111
DNA (477bp) protein (159aa)
30S ribosomal protein S7 n=6 Tax=Bacteroides RepID=RS7_BACV8
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000M1_scaffold_2576_7
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10143..12260
DNA (2118bp) protein (706aa)
Elongation factor G n=7 Tax=root RepID=EFG_BACV8
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
fusA; elongation factor G
L3_079_000M1_scaffold_2576_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12346..12651
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=51 Tax=root RepID=RS10_BACTN
SSU ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_079_000M1_scaffold_2576_9
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12741..13079
DNA (339bp) protein (113aa)
50S ribosomal protein L3 n=13 Tax=Bacteroides RepID=RL3_BACV8
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000M1_scaffold_2576_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13079..13705
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=7 Tax=root RepID=RL4_BACV8
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_2576_11
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13727..14017
DNA (291bp) protein (97aa)
50S ribosomal protein L23 n=6 Tax=Bacteroides RepID=A6KYJ3_BACV8
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_2576_12
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14023..14844
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=10 Tax=Bacteroides RepID=B6W5L6_9BACE
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L3_079_000M1_scaffold_2576_13
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14867..15136
DNA (270bp) protein (90aa)
30S ribosomal protein S19 n=32 Tax=root RepID=RS19_BACV8
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1121100 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes DSM 20611 = JCM 6294.;"
L3_079_000M1_scaffold_2576_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15173..15583
DNA (411bp) protein (137aa)
50S ribosomal protein L22 n=14 Tax=Bacteroides RepID=RL22_BACV8
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_079_000M1_scaffold_2576_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15590..15766
DNA (177bp) protein (59aa)
30S ribosomal protein S3 n=1 Tax=gut metagenome RepID=J9CS95_9ZZZZ
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Displaying 15 items

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