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L3_079_000M1_scaffold_1038

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1038_1
unknown

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comp(377..1609)
DNA (1233bp) protein (411aa)

This feature has no annotations

L3_079_000M1_scaffold_1038_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1810..2829)
DNA (1020bp) protein (340aa)
Dehydrogenase, FMN-dependent n=2 Tax=Oscillibacter RepID=U2QLF5_9FIRM
Dehydrogenase, FMN-dependent {ECO:0000313|EMBL:ERK57336.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative oxidoreductase
L3_079_000M1_scaffold_1038_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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2943..5690
DNA (2748bp) protein (916aa)
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0J3_9FIRM
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase {ECO:0000313|EMBL:CCZ46543.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_1038_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6083..6295
DNA (213bp) protein (71aa)
Predicted transcriptional regulator n=4 Tax=Eubacterium RepID=D4JV69_9FIRM
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL33331.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_079_000M1_scaffold_1038_5
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6305..7750
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF46980.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
hypothetical protein
L3_079_000M1_scaffold_1038_6
Veillonella montpellierensis, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7752..8861
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF46981.1}; TaxID=1401067 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella montpellierensis DNF00314.;"
hypothetical protein
L3_079_000M1_scaffold_1038_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9237..9779
DNA (543bp) protein (181aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BTZ7_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:ERI75278.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
MutT/nudix
L3_079_000M1_scaffold_1038_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9784..10179
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D1E4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75277.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_079_000M1_scaffold_1038_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10253..11908
DNA (1656bp) protein (552aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D6Y7_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI75276.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_079_000M1_scaffold_1038_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(11983..12933)
DNA (951bp) protein (317aa)
CorA-like protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT76_9FIRM
CorA-like protein {ECO:0000313|EMBL:CCX46183.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Mg2 transporter protein CorA family protein
L3_079_000M1_scaffold_1038_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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13093..14016
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S736_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46619.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_1038_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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14049..15590
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S414_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45559.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_079_000M1_scaffold_1038_13
unknown

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comp(16184..16429)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_079_000M1_scaffold_1038_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16532..19762)
DNA (3231bp) protein (1077aa)
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GTT3_9FIRM
Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Uncharacterized protein {ECO:0000313|EMBL:EHO35103.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_000M1_scaffold_1038_15
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19755..20129)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17028.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Predicted transcriptional regulator
L3_079_000M1_scaffold_1038_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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20297..21655
DNA (1359bp) protein (453aa)
Na+/H+ antiporter family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6Y1_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CCZ46549.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Na+:H+ antiporter, NhaC family
L3_079_000M1_scaffold_1038_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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21659..22462
DNA (804bp) protein (268aa)
HAD hydrolase family IIA n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0J6_9FIRM
HAD hydrolase family IIA {ECO:0000313|EMBL:CCZ46548.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
wciA; phosphotransferase
L3_079_000M1_scaffold_1038_18
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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22475..23311
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H172_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27241.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rRNA methylases
L3_079_000M1_scaffold_1038_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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23313..23930
DNA (618bp) protein (206aa)
Methyltransferase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYE5_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:EDM98911.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
smtA6; SAM-dependent methyltransferase
L3_079_000M1_scaffold_1038_20
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(24007..24600)
DNA (594bp) protein (198aa)
GTPase (EC:3.6.1.-)
Probable GTP-binding protein EngB n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ33_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_079_000M1_scaffold_1038_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(24616..27021)
DNA (2406bp) protein (802aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
lon; ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZU9_9FIRM
L3_079_000M1_scaffold_1038_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27033..28310)
DNA (1278bp) protein (426aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNK2_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
L3_079_000M1_scaffold_1038_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(28325..28927)
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D454_9FIRM
L3_079_000M1_scaffold_1038_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(29023..30414)
DNA (1392bp) protein (464aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Trigger factor n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S6T6_9FIRM
tig; trigger factor
L3_079_000M1_scaffold_1038_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(30520..31209)
DNA (690bp) protein (230aa)
Ser/Thr phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ60_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCZ46500.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative hydrolase
L3_079_000M1_scaffold_1038_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31235..31594)
DNA (360bp) protein (120aa)
UPF0102 protein BN557_01200 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQH5_9FIRM
UPF0102 protein BN557_01200 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_079_000M1_scaffold_1038_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(31591..32214)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNL1_9FIRM
L3_079_000M1_scaffold_1038_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(32211..33083)
DNA (873bp) protein (291aa)
Ribosome biogenesis GTPase A n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0F8_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative GTP-binding protein
L3_079_000M1_scaffold_1038_29

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comp(33098..33718)
DNA (621bp) protein (207aa)
Signal peptidase I {ECO:0000313|EMBL:EKC56539.1}; EC=3.4.21.- {ECO:0000313|EMBL:EKC56539.1};; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I (Fragment) n=1 Tax=human gut metagenome RepID=K1SMF3_9ZZZZ
L3_079_000M1_scaffold_1038_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(33883..34224)
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ71_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
rplS; 50S ribosomal protein L19
Displaying items 1-30 of 39 in total

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