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L3_079_000M1_scaffold_1163

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1163_1
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..169
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB76523.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_079_000M1_scaffold_1163_2
unknown

Not on your lists

comp(498..764)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_3
unknown

Not on your lists

comp(761..949)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_4
unknown

Not on your lists

comp(946..1089)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_5
unknown

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comp(1086..1220)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_6
unknown

Not on your lists

comp(1276..1386)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1401..1676)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SG46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP20159.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_079_000M1_scaffold_1163_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2014..2148)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO28050.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_079_000M1_scaffold_1163_9
unknown

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2346..2543
DNA (198bp) protein (66aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_10
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2557..2778
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AIJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ27881.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L3_079_000M1_scaffold_1163_11
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2775..3029
DNA (255bp) protein (85aa)
RelE/StbE family addiction module toxin n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JV25_9FIRM
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EOS38094.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Cytotoxic translational repressor of toxin-antitoxin stability system
L3_079_000M1_scaffold_1163_12
unknown

Not on your lists

3041..3538
DNA (498bp) protein (166aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_13
Olsenella uli, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3872..4237
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Olsenella profusa F0195 RepID=U2TU35_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EUB32447.1}; TaxID=1190621 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella uli MSTE5.;"
L3_079_000M1_scaffold_1163_14
unknown

Not on your lists

comp(4500..4901)
DNA (402bp) protein (134aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_15
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4942..5139
DNA (198bp) protein (66aa)
Putative phage DNA packaging-like protein n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VY26_THESW
putative phage DNA packaging-like protein
Putative phage protein {ECO:0000313|EMBL:ADL52148.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_079_000M1_scaffold_1163_16
Enterococcus villorum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5143..5454
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Enterococcus RepID=R1Y8C4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOH88822.1}; TaxID=1158604 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus villorum ATCC 700913.;"
Prophage pi2 protein
L3_079_000M1_scaffold_1163_17
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5451..5840
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6CA81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA62252.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_079_000M1_scaffold_1163_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5842..6228)
DNA (387bp) protein (129aa)
Exonuclease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B344_9CLOT
Exonuclease {ECO:0000313|EMBL:CCX49698.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_079_000M1_scaffold_1163_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6278..6706)
DNA (429bp) protein (143aa)
Exonuclease n=1 Tax=Clostridium sp. CAG:226 RepID=R5B344_9CLOT
Exonuclease {ECO:0000313|EMBL:CCX49698.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_079_000M1_scaffold_1163_20
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6794..7108
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZ90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDV96353.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
hypothetical protein
L3_079_000M1_scaffold_1163_21
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7111..7680
DNA (570bp) protein (190aa)
Phage major tail protein, phi13 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PND6_9FIRM
Phage major tail protein, phi13 family {ECO:0000313|EMBL:EFB76071.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
phage major tail protein, phi13 family
L3_079_000M1_scaffold_1163_22
Atopobium minutum, Atopobium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7722..8081
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Atopobium RepID=N2BYD8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EMZ41934.1}; TaxID=997872 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium minutum 10063974.;"
hypothetical protein
L3_079_000M1_scaffold_1163_23
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8093..8263
DNA (171bp) protein (57aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2E9T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM54186.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
L3_079_000M1_scaffold_1163_24
unknown

Not on your lists

comp(8359..8664)
DNA (306bp) protein (102aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_25
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8645..8971)
DNA (327bp) protein (109aa)
Sigma-70, region 4 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDT5_9CLOT
Sigma-70, region 4 {ECO:0000313|EMBL:EEG30283.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_079_000M1_scaffold_1163_26
unknown

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comp(9091..9375)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_27
unknown

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comp(10206..10529)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10641..10856)
DNA (216bp) protein (72aa)
DNA binding domain, excisionase family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H2F6_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEU97869.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_079_000M1_scaffold_1163_29
unknown

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comp(10843..11007)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_079_000M1_scaffold_1163_30
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

11198..11896
DNA (699bp) protein (233aa)
Putative transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S744_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:CCZ46629.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative transcriptional regulator
Displaying items 1-30 of 47 in total

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