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L3_079_000M1_scaffold_1240

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1240_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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347..625
DNA (279bp) protein (93aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4S3_BACV8
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS05044.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1240_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

622..1242
DNA (621bp) protein (207aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=R6ILN1_9BACE
surface protein
Uncharacterized protein {ECO:0000313|EMBL:KDS53833.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_1240_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1305..2966)
DNA (1662bp) protein (554aa)
Amino acid/peptide transporter n=3 Tax=Bacteroides RepID=C6Z9R6_9BACE
H+ symporter family protein {ECO:0000313|EMBL:KDS33333.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
H+/peptide symporter
L3_079_000M1_scaffold_1240_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3073..3558)
DNA (486bp) protein (162aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=6 Tax=Bacteroides RepID=C6Z9R7_9BACE
transcriptional regulator
L3_079_000M1_scaffold_1240_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3573..6401)
DNA (2829bp) protein (943aa)
Excinuclease ABC, A subunit n=3 Tax=Bacteroides RepID=C6Z9R8_9BACE
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
excinuclease ABC subunit A
L3_079_000M1_scaffold_1240_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6556..8985
DNA (2430bp) protein (810aa)
LysM domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VDG8_BACVU
LysM domain protein {ECO:0000313|EMBL:EFG16160.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
LysM repeat-containing protein
L3_079_000M1_scaffold_1240_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9067..9519)
DNA (453bp) protein (151aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R6_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73534.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1240_8
Bacteroides sp. 3_1_33FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9769..10104)
DNA (336bp) protein (112aa)
Uncharacterized protein n=16 Tax=Bacteroides RepID=A6L4R5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ19315.1}; TaxID=457391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_33FAA.;"
L3_079_000M1_scaffold_1240_9
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10121..10957)
DNA (837bp) protein (279aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=A6L4R4_BACV8
membrane protein
Outer membrane assembly lipoprotein YfiO {ECO:0000313|EMBL:CDF18584.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_1240_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11123..13156
DNA (2034bp) protein (678aa)
UvrABC system protein B n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P2Q5_9BACE
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
excinuclease ABC subunit B
L3_079_000M1_scaffold_1240_11
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13323..14336)
DNA (1014bp) protein (338aa)
Phosphate-selective porin O and P n=3 Tax=root RepID=C6Z9S5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV68454.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
porin
L3_079_000M1_scaffold_1240_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14527..15129)
DNA (603bp) protein (201aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4R1_BACV8
hypothetical protein
Uncharacterized protein, YigZ family {ECO:0000313|EMBL:EFG16168.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_079_000M1_scaffold_1240_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15163..15651)
DNA (489bp) protein (163aa)
Exonuclease n=7 Tax=Bacteroides RepID=D4VDH7_BACVU
exonuclease/DNA polymerase III epsilon c
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOS05031.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1240_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15859..18069
DNA (2211bp) protein (737aa)
Phospholipase, patatin family n=3 Tax=Bacteroides vulgatus RepID=D4VDH8_BACVU
patatin-like phospholipase
NTE family protein {ECO:0000313|EMBL:EOS05030.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1240_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18052..19230)
DNA (1179bp) protein (393aa)
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Mannonate dehydratase n=2 Tax=Bacteroides vulgatus RepID=A6L4Q8_BACV8
L3_079_000M1_scaffold_1240_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19288..21282)
DNA (1995bp) protein (665aa)
Pullulanase, type I {ECO:0000313|EMBL:EFG16172.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EFG16172.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Glycoside hydrolase family 13, candidate pullulanase n=3 Tax=root RepID=A6L4Q7_BACV8
pullulanase
L3_079_000M1_scaffold_1240_17
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21287..21799)
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IG71_9BACE
Holliday junction resolvase
L3_079_000M1_scaffold_1240_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21853..22158)
DNA (306bp) protein (102aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=A6L4Q5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY73523.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1240_19
unknown

Not on your lists

comp(22497..22604)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_079_000M1_scaffold_1240_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22586..22690)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AIU2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23611.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_079_000M1_scaffold_1240_21
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22699..22941)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NRW3_BACSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63223.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_1240_22
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23359..24450)
DNA (1092bp) protein (364aa)
Type I restriction enzyme HsdR protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PDS6_9BACE
Type I restriction enzyme HsdR protein {ECO:0000313|EMBL:EGF54905.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
restriction endonuclease or methylase
L3_079_000M1_scaffold_1240_23
Prevotella sp. CAG:1092, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24495..25190)
DNA (696bp) protein (232aa)
Phage repressor n=1 Tax=Prevotella sp. CAG:1092 RepID=R5PXW6_9BACT
Phage repressor {ECO:0000313|EMBL:CCZ13777.1}; TaxID=1262919 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1092.;"
hypothetical protein
L3_079_000M1_scaffold_1240_24
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25357..25641
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QNG0_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63216.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_1240_25
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25961..26122
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PDT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF54912.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
L3_079_000M1_scaffold_1240_26
unknown

Not on your lists

comp(26102..26413)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_079_000M1_scaffold_1240_27
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26543..26737
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K9I7_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63215.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_1240_28
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26739..26945
DNA (207bp) protein (69aa)
Conserved domain protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V8Y3_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63214.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_1240_29
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26942..27322
DNA (381bp) protein (127aa)
Transcriptional regulator LuxR family n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VG12_9BACE
LuxR family transcriptional regulator
LuxR family transcriptional regulator {ECO:0000313|EMBL:AII63213.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
L3_079_000M1_scaffold_1240_30
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27306..27605
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JBS4_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII63212.1}; TaxID=357276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei.;"
Displaying items 1-30 of 36 in total

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