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L3_079_000M1_scaffold_1249

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1249_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..225
DNA (225bp) protein (75aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAE1_BACVU
Putative outer membrane protein, probably involved in nutrient binding protein {ECO:0000313|EMBL:KDS53274.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_1249_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(513..1775)
DNA (1263bp) protein (421aa)
Collagenase n=14 Tax=Bacteroides RepID=A6KZB1_BACV8
collagenase
Uncharacterized protein {ECO:0000313|EMBL:EOR98349.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1249_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1926..2915
DNA (990bp) protein (330aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
tRNA-dihydrouridine synthase n=4 Tax=Bacteroides RepID=C6Z001_9BACE
dehydrogenase
L3_079_000M1_scaffold_1249_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3011..3862)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAD8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS28089.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
lipoprotein
L3_079_000M1_scaffold_1249_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4039..5016)
DNA (978bp) protein (326aa)
PAP2 family protein n=5 Tax=Bacteroides RepID=C6YZZ9_9BACE
PAP2 superfamily protein {ECO:0000313|EMBL:KDS53270.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_1249_6
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5007..6053)
DNA (1047bp) protein (349aa)
NAD dependent epimerase/dehydratase family protein n=6 Tax=root RepID=C6YZZ8_9BACE
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EET14216.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
NAD-dependent epimerase
L3_079_000M1_scaffold_1249_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6064..7005)
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=2 Tax=Bacteroides vulgatus RepID=D4VAD5_BACVU
Cation efflux system protein {ECO:0000313|EMBL:EFV69250.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
cation transporter
L3_079_000M1_scaffold_1249_8
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7097..9244
DNA (2148bp) protein (716aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Ribonuclease R n=5 Tax=Bacteroides RepID=A6KZB8_BACV8
ribonuclease R
L3_079_000M1_scaffold_1249_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9307..9435)
DNA (129bp) protein (43aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=G1ULX2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98356.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1249_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9545..10453
DNA (909bp) protein (303aa)
Serine acetyltransferase n=6 Tax=Bacteroides RepID=A6KZB9_BACV8
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:EFV69248.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_1249_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10604..10795
DNA (192bp) protein (64aa)
Uncharacterized protein n=6 Tax=root RepID=C6YZZ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS53264.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_1249_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10875..10997)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HB28_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOR98359.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1249_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11307..12755
DNA (1449bp) protein (483aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9J0B1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY79709.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
N6-adenine-specific DNA methylase
L3_079_000M1_scaffold_1249_14
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12762..14975
DNA (2214bp) protein (738aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NW80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF16911.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
dipeptidyl peptidase IV
L3_079_000M1_scaffold_1249_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14991..16259
DNA (1269bp) protein (423aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Phosphoribosylamine--glycine ligase n=6 Tax=Bacteroides RepID=A6KZC2_BACV8
phosphoribosylamine--glycine ligase
L3_079_000M1_scaffold_1249_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16308..17213
DNA (906bp) protein (302aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6YZZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY79706.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000M1_scaffold_1249_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17189..17656
DNA (468bp) protein (156aa)
SNARE-like domain protein n=8 Tax=Bacteroides RepID=C3RAG8_9BACE
integral membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY79705.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1249_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17661..18344
DNA (684bp) protein (228aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=C3RAG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOR98365.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_1249_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18697..21705)
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A6KZC6_BACV8
Uncharacterized protein {ECO:0000313|EMBL:ABR38790.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
hypothetical protein
L3_079_000M1_scaffold_1249_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21763..22260)
DNA (498bp) protein (166aa)
Transcriptional regulator, AraC family n=5 Tax=Bacteroides RepID=C6YZY6_9BACE
transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDS53255.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_1249_21
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22756..22929
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1ULC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX27757.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_079_000M1_scaffold_1249_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22935..23840
DNA (906bp) protein (302aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I8ZVX0_BACVU
metal ABC transporter substrate-binding
Putative metal ABC transporter substrate-binding {ECO:0000313|EMBL:CDF19051.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_1249_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23850..24671
DNA (822bp) protein (274aa)
ABC transporter, ATP-binding protein n=4 Tax=Bacteroides vulgatus RepID=D4VAC0_BACVU
metal ABC transporter ATP-binding protein
ABC transporter family protein {ECO:0000313|EMBL:KDS53252.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_1249_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24987..28391
DNA (3405bp) protein (1135aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6YZY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV69236.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_079_000M1_scaffold_1249_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28462..29073
DNA (612bp) protein (204aa)
Polysaccharide deacetylase n=7 Tax=Bacteroides RepID=A6KZD1_BACV8
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EFV69235.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_1249_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29131..30303)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=7 Tax=root RepID=C6YZY1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS53249.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_079_000M1_scaffold_1249_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30400..31203)
DNA (804bp) protein (268aa)
gluconate 5-dehydrogenase (EC:1.1.1.69)
Gluconate 5-dehydrogenase n=14 Tax=Bacteroides RepID=C3PWU9_9BACE
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:EOR98374.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1249_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31240..32082)
DNA (843bp) protein (281aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=4 Tax=Bacteroides RepID=A6KZD4_BACV8
L3_079_000M1_scaffold_1249_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32198..33598)
DNA (1401bp) protein (467aa)
Putative exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KZD5_BACV8
exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein
Putative exported D-alanyl-D-alanine carboxypeptidase penicillin-binding protein {ECO:0000313|EMBL:ABR38799.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_1249_30
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33598..33936)
DNA (339bp) protein (113aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
Dihydrolipoyl dehydrogenase n=2 Tax=Bacteroides RepID=C6YZX7_9BACE
pyridine nucleotide-disulfide oxidoreductase
Displaying 30 items

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