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L3_079_000M1_scaffold_1339

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1339_1
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1045)
DNA (1044bp) protein (348aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Bacteroides RepID=C6Z5E7_9BACE
Anti-sigma factor {ECO:0000313|EMBL:EFV67423.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
anti-sigma factor
L3_079_000M1_scaffold_1339_2
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1118..1684)
DNA (567bp) protein (189aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroides RepID=A6L2G4_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDF17107.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_1339_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1912..2985)
DNA (1074bp) protein (358aa)
Capsule biosynthesis protein n=2 Tax=Bacteroides vulgatus RepID=A6L2G3_BACV8
capsule biosynthesis protein
Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein) {ECO:0000313|EMBL:EOS06205.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1339_4
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3925..4593)
DNA (669bp) protein (223aa)
Bifunctional protein FolD n=5 Tax=Bacteroides RepID=C3QNH3_9BACE
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=665954 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus 3_8_47FAA.;"
L3_079_000M1_scaffold_1339_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4707..6029)
DNA (1323bp) protein (441aa)
Signal recognition particle protein n=7 Tax=Bacteroides RepID=A6L2G1_BACV8
signal recognition protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_079_000M1_scaffold_1339_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6128..7450)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=4 Tax=Bacteroides RepID=D4V3X1_BACVU
antiporter membrane protein
MATE efflux family protein {ECO:0000313|EMBL:KDS55801.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_079_000M1_scaffold_1339_7
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7790..9145
DNA (1356bp) protein (452aa)
Outer membrane protein transport protein, Ompp1/FadL/TodX family n=2 Tax=Bacteroides RepID=C6Z5T3_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFV67466.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
outer membrane protein
L3_079_000M1_scaffold_1339_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9204..9764)
DNA (561bp) protein (187aa)
RNA polymerase sigma-70 factor n=7 Tax=Bacteroides RepID=C6Z5T2_9BACE
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EIY82100.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1339_9
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9789..10880)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z5T1_9BACE
Transmembrane protein {ECO:0000313|EMBL:EFV67464.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
transmembrane protein
L3_079_000M1_scaffold_1339_10
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11081..13504
DNA (2424bp) protein (808aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NUJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF17099.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
beta-N-acetylhexosaminidase
L3_079_000M1_scaffold_1339_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13738..14568
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2F5_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39869.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_1339_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14703..15917
DNA (1215bp) protein (405aa)
Uncharacterized protein n=2 Tax=Bacteroides vulgatus RepID=I9J6I0_BACVU
outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82104.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1339_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15992..17242)
DNA (1251bp) protein (417aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
Phosphoglycerate kinase n=7 Tax=Bacteroides RepID=A6L2F3_BACV8
L3_079_000M1_scaffold_1339_14
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17469..18395
DNA (927bp) protein (309aa)
Sigma factor regulatory protein, FecR/PupR family n=5 Tax=Bacteroides RepID=D4V3W3_BACVU
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:EFV67490.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
L3_079_000M1_scaffold_1339_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18616..21963
DNA (3348bp) protein (1116aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2F1_BACV8
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EOS06193.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L3_079_000M1_scaffold_1339_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21982..23595
DNA (1614bp) protein (538aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3W1_BACVU
Putative lipoprotein {ECO:0000313|EMBL:EFG19458.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_079_000M1_scaffold_1339_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23835..24926
DNA (1092bp) protein (364aa)
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein n=2 Tax=Bacteroides vulgatus RepID=D4V3W0_BACVU
Transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein {ECO:0000313|EMBL:EFG19457.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glutamate/aspartate transporter
L3_079_000M1_scaffold_1339_18
unknown

Not on your lists

comp(24864..25079)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_079_000M1_scaffold_1339_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25174..26526
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L2E8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39862.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_1339_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26538..27098
DNA (561bp) protein (187aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A6L2E7_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82111.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1339_21
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27198..28193)
DNA (996bp) protein (332aa)
Antioxidant, AhpC/TSA family n=4 Tax=Bacteroides RepID=C6Z5S0_9BACE
Thiol-disulfide isomerase and thioredoxin {ECO:0000313|EMBL:CDF17088.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
thiol-disulfide isomerase and thioredoxin
L3_079_000M1_scaffold_1339_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28327..30075
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9UIL1_BACVU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY82113.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_079_000M1_scaffold_1339_23
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30391..30720)
DNA (330bp) protein (110aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L2E4_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDF17086.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_1339_24
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30722..31321)
DNA (600bp) protein (200aa)
Conserved domain protein n=4 Tax=root RepID=D4V3V4_BACVU
Uncharacterized protein {ECO:0000313|EMBL:CDF17085.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
integral membrane protein
L3_079_000M1_scaffold_1339_25
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31336..32025)
DNA (690bp) protein (230aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=I9UHQ5_BACVU
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CDF17084.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_079_000M1_scaffold_1339_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32032..36507)
DNA (4476bp) protein (1492aa)
CobN/magnesium chelatase domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V3V2_BACVU
CobN/magnesium chelatase domain protein {ECO:0000313|EMBL:EFG19449.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
protoporphyrin IX magnesium chelatase
L3_079_000M1_scaffold_1339_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36554..38710)
DNA (2157bp) protein (719aa)
TonB-dependent receptor n=4 Tax=Bacteroides RepID=A6L2E0_BACV8
TonB-dependent receptor {ECO:0000313|EMBL:EFV67478.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
TonB-dependent receptor
L3_079_000M1_scaffold_1339_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38724..39350)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Bacteroides vulgatus RepID=A6L2D9_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR39853.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_079_000M1_scaffold_1339_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39388..39855)
DNA (468bp) protein (156aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L2D8_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS06180.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_079_000M1_scaffold_1339_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39892..40065
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=G1UM76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS06179.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Displaying items 1-30 of 51 in total

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