ggKbase home page

L3_079_000M1_scaffold_1419

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_1419_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..485)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2F125_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY80281.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_079_000M1_scaffold_1419_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(623..1060)
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Z8Y5_BACUN
DoxX family protein {ECO:0000313|EMBL:KDS48649.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
DoxX family protein
L3_079_000M1_scaffold_1419_3
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1117..1998)
DNA (882bp) protein (294aa)
Pyridine nucleotide-disulfide oxidoreductase n=5 Tax=Bacteroides RepID=E5VC85_9BACE
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFV25533.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
NADH dehydrogenase
L3_079_000M1_scaffold_1419_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2269..3408
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VC84_9BACE
Surface antigen family protein {ECO:0000313|EMBL:KDS48651.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_079_000M1_scaffold_1419_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3395..5095
DNA (1701bp) protein (567aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8Z7F2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY80277.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
sulfatase
L3_079_000M1_scaffold_1419_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5120..5536)
DNA (417bp) protein (139aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7UZE3_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS48653.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_079_000M1_scaffold_1419_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5538..6914)
DNA (1377bp) protein (459aa)
Tat pathway signal sequence domain protein n=2 Tax=Bacteroides RepID=A7UZE2_BACUN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDO55637.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
putative aldo/keto reductase
L3_079_000M1_scaffold_1419_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6960..8306)
DNA (1347bp) protein (449aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides RepID=D2F118_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS07076.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
putative transmembrane ferredoxin-like protein
L3_079_000M1_scaffold_1419_9
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8556..10346)
DNA (1791bp) protein (597aa)
Glycosyl hydrolase, family 15 n=2 Tax=Bacteroides RepID=A7UZD9_BACUN
Glycosyl hydrolase family 15 {ECO:0000313|EMBL:EFV25527.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
glycoside hydrolase
L3_079_000M1_scaffold_1419_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10352..12640)
DNA (2289bp) protein (763aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HST7_BACUN
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:EOS07078.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
bifunctional trehalose-6-phosphate synthase/HAD hydrolase
L3_079_000M1_scaffold_1419_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12746..13303)
DNA (558bp) protein (186aa)
Flavodoxin-like fold protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VC77_9BACE
Flavodoxin-like fold protein {ECO:0000313|EMBL:EFV25525.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Putative NADPH-quinone reductase (modulator of drug activity B)
L3_079_000M1_scaffold_1419_12
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13432..14289
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5CCD4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX62467.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
Site-specific recombinase XerD
L3_079_000M1_scaffold_1419_13
unknown

Not on your lists

comp(14527..14703)
DNA (177bp) protein (59aa)

This feature has no annotations

L3_079_000M1_scaffold_1419_14
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14895..15338)
DNA (444bp) protein (148aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7NMH6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF13273.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
peptidase S24
L3_079_000M1_scaffold_1419_15
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15335..16189)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NIM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF13274.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L3_079_000M1_scaffold_1419_16
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16182..17816)
DNA (1635bp) protein (545aa)
ATPase n=3 Tax=Bacteroides RepID=R7NKP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA55036.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
ABC transporter ATP-binding protein
L3_079_000M1_scaffold_1419_17
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17813..18931)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RG65_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA55037.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
L3_079_000M1_scaffold_1419_18
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18928..19194)
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=U6RIM2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF13278.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L3_079_000M1_scaffold_1419_19
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19291..22173)
DNA (2883bp) protein (961aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NKP8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF13280.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
cell surface protein
L3_079_000M1_scaffold_1419_20
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22274..22390)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6REX5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA55040.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
L3_079_000M1_scaffold_1419_21
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22708..23916)
DNA (1209bp) protein (403aa)
Integrase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7ENY5_9BACE
Integrase {ECO:0000313|EMBL:CDE04365.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
Site-specific recombinase XerD
L3_079_000M1_scaffold_1419_22
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23921..24595)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH51_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01795.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
hypothetical protein
L3_079_000M1_scaffold_1419_23
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24845..25549)
DNA (705bp) protein (235aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH50_9BACE
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EDV01794.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Relaxase/Mobilisation nuclease domain.
L3_079_000M1_scaffold_1419_24
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25546..25908)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH49_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01793.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
mobilization protein MobC
L3_079_000M1_scaffold_1419_25
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26066..26578)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TH71_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82475.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Protein of unknown function (DUF3408).
L3_079_000M1_scaffold_1419_26
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27149..27283)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QWP0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EIY76483.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_079_000M1_scaffold_1419_27
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27324..27887)
DNA (564bp) protein (188aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH47_9BACE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDV01791.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
RNA polymerase subunit sigma-70
L3_079_000M1_scaffold_1419_28
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28376..28879
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JH45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01789.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DNA-binding protein
L3_079_000M1_scaffold_1419_29
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29718..30584)
DNA (867bp) protein (289aa)
Metallo-beta-lactamase domain protein n=2 Tax=Bacteroides RepID=D2F114_9BACE
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EFA18625.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
metallo-beta-lactamase superfamily hydrolase
L3_079_000M1_scaffold_1419_30
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30667..32049)
DNA (1383bp) protein (461aa)
Transporter, major facilitator family protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UZD4_BACUN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDO55629.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
permease
Displaying items 1-30 of 41 in total

View Taxonomy