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L3_079_000M1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 180 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_11_1
unknown

Not on your lists

comp(85..240)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_000M1_scaffold_11_2
unknown

Not on your lists

comp(388..822)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_079_000M1_scaffold_11_3
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1040..2461
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8A5M1_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO77324.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
L3_079_000M1_scaffold_11_4
unknown

Not on your lists

2478..2732
DNA (255bp) protein (85aa)

This feature has no annotations

L3_079_000M1_scaffold_11_5
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2754..3671
DNA (918bp) protein (306aa)
Peptidase C10 family n=1 Tax=Parabacteroides sp. D13 RepID=C7X5R9_9PORP
Peptidase C10 family {ECO:0000313|EMBL:EEU53239.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_079_000M1_scaffold_11_6
unknown

Not on your lists

comp(3913..4059)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_079_000M1_scaffold_11_7
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4097..7384)
DNA (3288bp) protein (1096aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037C6F9A
Protease {ECO:0000313|EMBL:KIO44564.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
peptidase S41
L3_079_000M1_scaffold_11_8
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7381..7950)
DNA (570bp) protein (190aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:KIO44563.1}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037DC5A0
L3_079_000M1_scaffold_11_9
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8122..8358
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037F6F41
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
acyl carrier protein
L3_079_000M1_scaffold_11_10
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8374..9618
DNA (1245bp) protein (415aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-ACP synthase n=1 Tax=Butyricimonas synergistica RepID=UPI000361EA7F
L3_079_000M1_scaffold_11_11
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9642..10382
DNA (741bp) protein (247aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Ribonuclease 3 (EC:3.1.26.3)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003822683
L3_079_000M1_scaffold_11_12
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10384..10953)
DNA (570bp) protein (190aa)
elongation factor P n=1 Tax=Butyricimonas synergistica RepID=UPI00036A9631
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141, ECO:0000313|EMBL:KIO44559.1}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Elongation factor P
L3_079_000M1_scaffold_11_13
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11180..12061)
DNA (882bp) protein (294aa)
oxidoreductase n=1 Tax=Butyricimonas synergistica RepID=UPI00035FBA82
Uncharacterized protein {ECO:0000313|EMBL:CCZ08862.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
Predicted SAM-dependent methyltransferases
L3_079_000M1_scaffold_11_14
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(12094..12780)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003669AEC
Glycoprotease {ECO:0000313|EMBL:KIO44558.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
universal protein YeaZ
L3_079_000M1_scaffold_11_15
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12850..13425)
DNA (576bp) protein (192aa)
translation factor Sua5 n=1 Tax=Butyricimonas synergistica RepID=UPI0003637292
Translation factor Sua5 {ECO:0000313|EMBL:KIO44557.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Sua5/YciO/YrdC/YwlC family protein
L3_079_000M1_scaffold_11_16
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

13737..14846
DNA (1110bp) protein (370aa)
Uncharacterized protein id=2046733 bin=GWE2_Bacteroidetes_40_15 species=Bacteroides cellulosilyticus genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
L3_079_000M1_scaffold_11_17
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14983..15897
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii 1_2_48FAA RepID=E5X3M0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV28252.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
L3_079_000M1_scaffold_11_18
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15964..16860)
DNA (897bp) protein (299aa)
oxidoreductase n=1 Tax=Butyricimonas synergistica RepID=UPI0003659D1F
Oxidoreductase {ECO:0000313|EMBL:KIO44555.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
putative oxidoreductase
L3_079_000M1_scaffold_11_19
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17383..19263
DNA (1881bp) protein (627aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Butyricimonas synergistica RepID=UPI000373DCBA
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIO44554.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
L3_079_000M1_scaffold_11_20
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19355..21511
DNA (2157bp) protein (719aa)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KIO44553.1}; EC=5.4.99.2 {ECO:0000313|EMBL:KIO44553.1};; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
methylmalonyl-CoA mutase, large subunit (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Butyricimonas synergistica RepID=UPI000376142D
L3_079_000M1_scaffold_11_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21521..22318)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IYM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01424.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
probable phosphoesterase
L3_079_000M1_scaffold_11_22
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22473..23636
DNA (1164bp) protein (388aa)
cystathionine beta-lyase (EC:4.4.1.8)
Cystathionine beta-lyase {ECO:0000313|EMBL:ADY32427.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ADY32427.1};; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00036F43E0
L3_079_000M1_scaffold_11_23

Not on your lists

23818..24654
DNA (837bp) protein (279aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037A965C
Uncharacterized protein {ECO:0000313|EMBL:EKD31519.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L3_079_000M1_scaffold_11_24
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24758..25378
DNA (621bp) protein (207aa)
membrane protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037CE290
Membrane protein {ECO:0000313|EMBL:KIO44537.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
hypothetical protein
L3_079_000M1_scaffold_11_25
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25449..27020)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FWW0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB06492.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_079_000M1_scaffold_11_26
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27062..27817)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F0J6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB06493.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L3_079_000M1_scaffold_11_27
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27832..29250)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FAP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB06494.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_079_000M1_scaffold_11_28
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(29269..32556)
DNA (3288bp) protein (1096aa)
Putative uncharacterized protein id=1772968 bin=GWE2_Bacteroidetes_40_15 species=Prevotella bergensis genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
TonB-dependent receptor plug
Tax=BJP_08E140C01_Bacteroidetes_41_49
L3_079_000M1_scaffold_11_29
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32728..33885)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037E29B6
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:CDB06601.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
anti-FecI sigma factor, FecR
L3_079_000M1_scaffold_11_30
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33965..34510)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037F686F
RNA polymerase, sigma-24 subunit, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADY33724.1}; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
Displaying items 1-30 of 180 in total

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