ggKbase home page

L3_079_000M1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 149 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_18_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(237..1913)
DNA (1677bp) protein (559aa)
Cna protein B-type domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75569.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_18_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1955..3616)
DNA (1662bp) protein (554aa)
Cna protein B-type domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75568.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_18_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3609..6959)
DNA (3351bp) protein (1117aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8N3_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EBA40249.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_079_000M1_scaffold_18_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7465..8286)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4X9_9ACTN
Cof-like hydrolase {ECO:0000313|EMBL:CDA36187.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HAD-superfamily hydrolase, subfamily IIB
L3_079_000M1_scaffold_18_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8510..9796)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z923_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36188.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
major facilitator superfamily protein
L3_079_000M1_scaffold_18_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10061..11359)
DNA (1299bp) protein (433aa)
Molybdenum cofactor biosynthesis protein C n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHY6_9ACTN
Molybdenum cofactor biosynthesis protein C {ECO:0000313|EMBL:CDA36189.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_079_000M1_scaffold_18_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11364..12419)
DNA (1056bp) protein (352aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE8_9ACTN
molybdenum cofactor biosynthesis protein A
L3_079_000M1_scaffold_18_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12655..13692)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP88_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75562.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_18_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13908..15815)
DNA (1908bp) protein (636aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4Y4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75561.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_079_000M1_scaffold_18_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15799..17628)
DNA (1830bp) protein (610aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z927_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75560.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_079_000M1_scaffold_18_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17887..19233
DNA (1347bp) protein (449aa)
MATE efflux family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P1_9ACTN
MATE efflux family protein {ECO:0000313|EMBL:EBA40257.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
matE; MATE efflux family protein
L3_079_000M1_scaffold_18_12
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19374..19502)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40258.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_18_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19627..20049)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75556.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_079_000M1_scaffold_18_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20046..20438)
DNA (393bp) protein (131aa)
Prevent-host-death family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P4_9ACTN
Prevent-host-death family protein {ECO:0000313|EMBL:EBA40260.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_079_000M1_scaffold_18_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20723..22951)
DNA (2229bp) protein (743aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
NAD-dependent DNA ligase (EC:6.5.1.2)
DNA ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4Y9_9ACTN
L3_079_000M1_scaffold_18_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23200..24660)
DNA (1461bp) protein (487aa)
Trypsin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P7_9ACTN
Trypsin {ECO:0000313|EMBL:EBA40263.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
peptidase S1 and S6 chymotrypsin/Hap
L3_079_000M1_scaffold_18_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24869..25531)
DNA (663bp) protein (221aa)
Transcriptional regulatory protein C-terminal domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHZ2_9ACTN
Transcriptional regulatory protein C-terminal domain protein {ECO:0000313|EMBL:CDA36199.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
two component transcriptional regulator, winged helix family
L3_079_000M1_scaffold_18_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25582..26919)
DNA (1338bp) protein (446aa)
Glutamine synthetase, beta-grasp domain protein {ECO:0000313|EMBL:EBA40265.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EBA40265.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, beta-grasp domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8P9_9ACTN
L3_079_000M1_scaffold_18_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27054..28076)
DNA (1023bp) protein (341aa)
Transcriptional regulator, LacI family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Q1_9ACTN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EBA40267.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LacI family transcriptional regulator
L3_079_000M1_scaffold_18_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28311..29345
DNA (1035bp) protein (345aa)
Kinase, PfkB family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Q2_9ACTN
Kinase, PfkB family {ECO:0000313|EMBL:EBA40268.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PfkB domain-containing protein
L3_079_000M1_scaffold_18_21
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29599..30240
DNA (642bp) protein (214aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:EBA40269.1}; EC=4.1.2.14 {ECO:0000313|EMBL:EBA40269.1};; EC=4.1.3.16 {ECO:0000313|EMBL:EBA40269.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8Q3_9ACTN
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
L3_079_000M1_scaffold_18_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30634..31326)
DNA (693bp) protein (231aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHZ5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75547.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator, GntR family
L3_079_000M1_scaffold_18_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31585..33363)
DNA (1779bp) protein (593aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Putative dihydroxy-acid dehydratase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75538.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_079_000M1_scaffold_18_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(33472..34833)
DNA (1362bp) protein (454aa)
Transporter, gluconate:H+ symporter family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R4_9ACTN
Transporter, gluconate:H+ symporter family {ECO:0000313|EMBL:EBA40280.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
gluconate:H+ symporter, GntP family
L3_079_000M1_scaffold_18_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35068..35760
DNA (693bp) protein (231aa)
FCD domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R5_9ACTN
FCD domain protein {ECO:0000313|EMBL:EBA40281.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
transcriptional regulator, GntR family
L3_079_000M1_scaffold_18_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35921..36730
DNA (810bp) protein (270aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R6_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EBA40282.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
gluconate 5-dehydrogenase
L3_079_000M1_scaffold_18_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36933..37574
DNA (642bp) protein (214aa)
Ribose/Galactose Isomerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8R8_9ACTN
Ribose/Galactose Isomerase {ECO:0000313|EMBL:EBA40284.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Ribose/galactose isomerase
L3_079_000M1_scaffold_18_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37693..39642)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z6M3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75536.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_079_000M1_scaffold_18_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(39888..40478)
DNA (591bp) protein (197aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
kdpC; high affinity K+-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GD60_9ACTN
L3_079_000M1_scaffold_18_30
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(40491..42545)
DNA (2055bp) protein (685aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
K+-transporting ATPase, B subunit (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7P4_9ACTN
Displaying items 1-30 of 149 in total

View Taxonomy