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L3_079_000M1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 177 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_30_1
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60678.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_079_000M1_scaffold_30_2
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

362..1069
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RTZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37922.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L3_079_000M1_scaffold_30_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1120..1494)
DNA (375bp) protein (125aa)
Death-on-curing family protein n=4 Tax=Roseburia RepID=D4KKG2_9FIRM
death-on-curing family protein
Death-on-curing family protein {ECO:0000313|EMBL:CDA57214.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_079_000M1_scaffold_30_4

Not on your lists

comp(1491..1733)
DNA (243bp) protein (81aa)
Antitoxin system, antitoxin component, PHD family n=1 Tax=human gut metagenome RepID=K1S212_9ZZZZ
Antitoxin system, antitoxin component, PHD family {ECO:0000313|EMBL:EKC49404.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_079_000M1_scaffold_30_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1820..2206
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60682.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
conserved hypothetical protein
L3_079_000M1_scaffold_30_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2234..4582
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60684.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Domain of unknown function DUF87.
L3_079_000M1_scaffold_30_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4653..6383
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BDS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23336.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_079_000M1_scaffold_30_8
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6502..8091)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WHH0_9BACI
Uncharacterized protein {ECO:0000313|EMBL:ENH95627.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
hypothetical protein
L3_079_000M1_scaffold_30_9
Firmicutes bacterium CAG:449, Firmicutes, Bacteria

Not on your lists

comp(8108..8971)
DNA (864bp) protein (288aa)
Putative phosphatase n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6QXD1_9FIRM
Putative phosphatase {ECO:0000313|EMBL:CDC41288.1}; TaxID=1263023 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:449.;"
HAD family hydrolase
L3_079_000M1_scaffold_30_10
unknown

Not on your lists

comp(9487..10164)
DNA (678bp) protein (226aa)

This feature has no annotations

L3_079_000M1_scaffold_30_11
unknown

Not on your lists

comp(10151..10783)
DNA (633bp) protein (211aa)

This feature has no annotations

L3_079_000M1_scaffold_30_12
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10790..12463)
DNA (1674bp) protein (558aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI000287FD46
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC12856.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /; HTE831).;"
L3_079_000M1_scaffold_30_13
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12423..14081)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. animalis 4_8 RepID=R9RA17_FUSNU
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AJH14096.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
L3_079_000M1_scaffold_30_14
unknown

Not on your lists

comp(14078..14686)
DNA (609bp) protein (203aa)

This feature has no annotations

L3_079_000M1_scaffold_30_15
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14872..15729)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI000374731B
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AJQ26587.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
L3_079_000M1_scaffold_30_16
unknown

Not on your lists

comp(15722..16981)
DNA (1260bp) protein (420aa)

This feature has no annotations

L3_079_000M1_scaffold_30_17
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16982..18481)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI00034DE8FD
Alpha/beta superfamily hydrolase {ECO:0000313|EMBL:GAF08747.1}; TaxID=1236976 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus pini JCM 16418.;"
permease
L3_079_000M1_scaffold_30_18
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(18474..18701)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Paenibacillus RepID=F5LGG9_9BACL
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
L3_079_000M1_scaffold_30_19
unknown

Not on your lists

comp(18768..19694)
DNA (927bp) protein (309aa)

This feature has no annotations

L3_079_000M1_scaffold_30_20
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19747..20628)
DNA (882bp) protein (294aa)
Thymidylate synthase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M0Z7_9BACL
Thymidylate synthase {ECO:0000313|EMBL:EST51575.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
thymidylate synthase
L3_079_000M1_scaffold_30_21
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20719..22167)
DNA (1449bp) protein (483aa)
lcfB1; long-chain-fatty-acid--CoA ligase LcfB (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase LcfB {ECO:0000313|EMBL:AIS52127.1}; EC=6.2.1.3 {ECO:0000313|EMBL:AIS52127.1};; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui (Acetogenium kivui).;"
Uncharacterized protein n=1 Tax=Bacillus cereus VD169 RepID=J8M9Z4_BACCE
L3_079_000M1_scaffold_30_22
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(22189..22923)
DNA (735bp) protein (245aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Streptococcus constellatus subsp. pharyngis C1050 RepID=T1ZPU8_STRCV
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AGK60086.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticallidus PM70-1.;"
L3_079_000M1_scaffold_30_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23295..24614)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TWZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91640.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_079_000M1_scaffold_30_24
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24611..25327)
DNA (717bp) protein (239aa)
Two-component system, LytT family, response regulator n=1 Tax=Clostridium sp. ASF502 RepID=N2A6P5_9CLOT
Response regulator of the LytR/AlgR family
Two-component system, LytT family, response regulator {ECO:0000313|EMBL:EMZ24997.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_079_000M1_scaffold_30_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25379..25714)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HZT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30267.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_079_000M1_scaffold_30_26
unknown

Not on your lists

25978..26133
DNA (156bp) protein (52aa)

This feature has no annotations

L3_079_000M1_scaffold_30_27
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26130..26723
DNA (594bp) protein (198aa)
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide n=1 Tax=Eubacterium sp. CAG:161 RepID=R5LBH7_9FIRM
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide {ECO:0000313|EMBL:CCY70362.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Accessory gene regulator B.
L3_079_000M1_scaffold_30_28
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26993..27412
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60701.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Sigma-70, region 4.
L3_079_000M1_scaffold_30_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27968..29923
DNA (1956bp) protein (652aa)
Uncharacterized protein n=2 Tax=root RepID=R6QMP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37893.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Rad3-related DNA helicases
L3_079_000M1_scaffold_30_30

Not on your lists

29939..30118
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKC73985.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying items 1-30 of 177 in total

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