ggKbase home page

L3_079_000M1_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_079_000M1_scaffold_46_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(156..2240)
DNA (2085bp) protein (695aa)
peptidase M3 n=1 Tax=Alistipes onderdonkii RepID=UPI000378F118
Zn-dependent oligopeptidase {ECO:0000313|EMBL:AFL76737.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Zn-dependent oligopeptidase
L3_079_000M1_scaffold_46_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2332..4461)
DNA (2130bp) protein (710aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Putative peptidyl-dipeptidase dcp n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL82_9BACT
Putative peptidyl-dipeptidase dcp {ECO:0000313|EMBL:CDD24408.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_46_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4600..5319
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1R0_9BACT
RsmE family RNA methyltransferase
L3_079_000M1_scaffold_46_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5412..5954
DNA (543bp) protein (181aa)
Chromate transport protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6X9_9BACT
Chromate transport protein {ECO:0000313|EMBL:CDD24406.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chromate transport protein ChrA
L3_079_000M1_scaffold_46_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5951..6523
DNA (573bp) protein (191aa)
Chromate transport protein ChrA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRX1_9BACT
Chromate transport protein ChrA {ECO:0000313|EMBL:CDD24405.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chromate transport protein ChrA
L3_079_000M1_scaffold_46_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6554..7273
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZC4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24404.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7238..7525)
DNA (288bp) protein (96aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL79_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD24403.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7538..8548)
DNA (1011bp) protein (337aa)
Putative SAM-dependent methyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1Q6_9BACT
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CDD24402.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SAM-dependent methyltransferase
L3_079_000M1_scaffold_46_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8557..11613)
DNA (3057bp) protein (1019aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Beta-galactosidase/beta-glucuronidase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6X2_9BACT
beta-galactosidase/beta-glucuronidase
L3_079_000M1_scaffold_46_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11632..13515)
DNA (1884bp) protein (628aa)
Peptidase U32 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRW7_9BACT
Peptidase U32 family {ECO:0000313|EMBL:CDD24400.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
collagenase-like protease
L3_079_000M1_scaffold_46_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13651..14922
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZB8_9BACT
Seryl-tRNA synthetase {ECO:0000313|EMBL:CDD24399.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_46_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14975..15142
DNA (168bp) protein (56aa)
4Fe-4S protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL74_9BACT
4Fe-4S protein {ECO:0000313|EMBL:CDD24398.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
4Fe-4S binding protein
L3_079_000M1_scaffold_46_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15210..16088
DNA (879bp) protein (293aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1Q2_9BACT
beta-lactamase
L3_079_000M1_scaffold_46_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16282..16863
DNA (582bp) protein (194aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.18 2.3.1.79)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6W6_9BACT
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:CDD24396.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_46_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17251..18468)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRW3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24395.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18712..19824)
DNA (1113bp) protein (371aa)
Peptide chain release factor 2 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZB0_9BACT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
peptide chain release factor 2
L3_079_000M1_scaffold_46_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19844..20497)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R6XL68_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24393.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20497..21900)
DNA (1404bp) protein (468aa)
MATE efflux family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1P6_9BACT
MATE efflux family protein {ECO:0000313|EMBL:CDD24392.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
efflux protein, MATE family
L3_079_000M1_scaffold_46_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22121..23596)
DNA (1476bp) protein (492aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Alistipes onderdonkii RepID=UPI0003768C5C
L3_079_000M1_scaffold_46_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23641..25386
DNA (1746bp) protein (582aa)
DNA/RNA helicase superfamily II n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRV9_9BACT
DNA/RNA helicase superfamily II {ECO:0000313|EMBL:CDD24390.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
DNA/RNA helicase
L3_079_000M1_scaffold_46_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25698..28931
DNA (3234bp) protein (1078aa)
Putative membrane protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZA5_9BACT
Putative membrane protein {ECO:0000313|EMBL:CDD24389.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
di-/tricarboxylate transporter
L3_079_000M1_scaffold_46_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29216..29506
DNA (291bp) protein (97aa)
Transcription regulator n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL63_9BACT
Transcription regulator {ECO:0000313|EMBL:CDD24388.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
transcription regulator
L3_079_000M1_scaffold_46_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29537..31216)
DNA (1680bp) protein (560aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1P2_9BACT
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:CDD24387.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
AMP-forming long-chain acyl-CoA synthetase
L3_079_000M1_scaffold_46_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31316..32224
DNA (909bp) protein (303aa)
Uncharacterized Fe-S protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6V5_9BACT
Uncharacterized Fe-S protein {ECO:0000313|EMBL:CDD24386.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32308..34449)
DNA (2142bp) protein (714aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRV4_9BACT
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:CDD24385.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_46_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34442..34546)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24384.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_079_000M1_scaffold_46_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34658..35617)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037FC55E
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD24383.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_079_000M1_scaffold_46_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


36362..38116
DNA (1755bp) protein (585aa)
Aspartate--tRNA ligase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6U7_9BACT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD24381.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
aspartyl-tRNA synthetase
L3_079_000M1_scaffold_46_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38246..39520
DNA (1275bp) protein (425aa)
Recombination factor protein RarA n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRV1_9BACT
Recombination factor protein RarA {ECO:0000313|EMBL:CDD24380.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
AAA ATPase
L3_079_000M1_scaffold_46_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39596..40090
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Phosphoesterase MJ0936 family n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZ92_9BACT
phosphoesterase
Displaying items 1-30 of 116 in total

View Taxonomy